Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1577 ATGTGTGTTGTTAGTAGTAACTGCAAGAAAACAAATCTTGTTTTGAATGGTTATCTGTGGTCTTCTTTGAATTATCAGCTCATGAGTCCTCAGACAAGTCTTTTCCATCCACACCCAACCATCACTTCCTTTGTTCTACAACTAATATATATTCTTCCAAGGCTACTCTTCCTGTTATCACCAACAATGGCTGATGGTCAAGAATCAGACAAGAACATCGAGATATGGAAGATCAAGAAATTGATCAAAGCATTGGAATCTGCTAGAGGTAACGGTACCAGCATGATTTCTCTGATCATGCCTCCACGTGATCAGGTATCTCGGGTCACTAAGATGTTAGGAGATGAATTTGGAACTGCGTCAAATATCAAAAGTCGGGTAAACAGGCAGTCAGTGTTGGGAGCCATTACGTCTGCTCAGCAGAGGTTGAAACTATATAATAAGGTTCCTCCAAATGGTTTGGTCCTTTACACTGGAACCATTGTCACTGAAGATGGTAAGGAAAAGAAGGTTACAATTGATTTTGAACCTTTCAAGCCTATCAATGCATCACTCTACCTCTGTGATAACAAGTTTCATACAGAAGCTCTGAATGAACTTTTAGAATCTGATGACAAGTTTGGTTTCATTGTTATGGATGGAAATGGCACCCTTTTCGGGACTTTAAGTGGAAACACCCGTGAAGTGCTTCATAAATTTACTGTTGACCTGCCCAAGAAACATGGTAGAGGAGGTCAGTCAGCTTTGCGTTTTGCTCGTCTTCGGATGGAAAAGCGTCACAACTATGTTAGAAAGACTGCAGAACTTGCGACTCAGTTTTACATCAATCCTGCTACTAGTCAGCCTAATGTCTCTGGACTCATACTTGCCGGTTCAGCTGACTTCAAGACTGAACTGAGCCAGTCAGATATGTTTGATCCTCGTTTGCAGGCAAAGATATTGAACGTGGTTGATGTTTCTTATGGTGGGGAAAATGGATTTAATCAGGCGATTGAGTTATCTGCAGAGATTTTATCAAACGTGAAGTTCATTCAAGAGAAACGTTTGATAGGGAAATATTTTGAAGAGATTAGCCAGGATACTGGGAAATATGTCTTTGGGATTGATGACACGTTGAAGGCTCTGGATATGGGTGCTGTGGAGACACTTATTGTATGGGAAAATTTGGATATTAGTAGGTACGTGCTGAAAAATGGTACTACTGCGGAGATTGTCATAAAGCACTTGAACAAGGAACAAGAGAATGATCAAAGCAATTTCCGAGATTCAGCCACCCTTGCAGAGTTAGAGGTGCAGGAGAAGATGCCCTTGCTCGAGTGGTTTGCCAATGAGTACAAACGATTTGGATGCTGTCTGGAATTTGTGACCAATAAATCTCAAGAAGGATCACAATTTTGCCGAGGATTTGGTGGTATTGGCGGTATCCTTCGCTACCAGCTTGACATCAGATCATTTGATGAGTTATCTGATGATGGTGAAGTGTACGAAGATTCTGATTGA 1500 0.4113 MCVVSSNCKKTNLVLNGYLWSSLNYQLMSPQTSLFHPHPTITSFVLQLIYILPRLLFLLSPTMADGQESDKNIEIWKIKKLIKALESARGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGIDDTLKALDMGAVETLIVWENLDISRYVLKNGTTAEIVIKHLNKEQENDQSNFRDSATLAELEVQEKMPLLEWFANEYKRFGCCLEFVTNKSQEGSQFCRGFGGIGGILRYQLDIRSFDELSDDGEVYEDSD 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1577 499 Pfam eRF1 domain 1 80 200 IPR005140 -
Lal13g1577 499 Gene3D - 341 499 IPR029064 -
Lal13g1577 499 PANTHER EUKARYOTIC PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1-3-LIKE 63 499 - -
Lal13g1577 499 Pfam eRF1 domain 3 343 480 IPR005142 -
Lal13g1577 499 SMART eRF1_1_2 66 202 IPR005140 -
Lal13g1577 499 PANTHER PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 63 499 IPR004403 GO:0003747|GO:0006415
Lal13g1577 499 Pfam eRF1 domain 2 206 339 IPR005141 -
Lal13g1577 499 SUPERFAMILY N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 68 202 IPR024049 -
Lal13g1577 499 SUPERFAMILY Translational machinery components 204 338 - -
Lal13g1577 499 TIGRFAM aRF1/eRF1: peptide chain release factor 1, archaeal and eukaryotic forms 74 479 IPR004403 GO:0003747|GO:0006415
Lal13g1577 499 SUPERFAMILY L30e-like 340 482 IPR029064 -
Lal13g1577 499 Gene3D eRF1 domain 2 198 339 IPR042226 -
Lal13g1577 499 Gene3D eRF1 domain 1 62 197 IPR024049 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1577 Lal-Chr13 15608558 15612055 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g1577 63 499 Eukaryotic Initiation Factors Gene Family AT3G26618 92.906 0.0 836
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1577 K03265 - qsu:111999806 838.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g1305 12 16015821 16017134 Lal13g1577 13 15608558 15612055 LSH