Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1567 ATGTCACATACTGTTGAAGCAATATTAGGAGGAGCTCTTGGATCTTTGGCATTATTTGGGATTATTATGTTACTTCTATGGTTCTTTTTGTTTAAACAAAGGTGTGTTTCAATGACTTTAGAGAATGGATTATCTATTCCATCACAAGTGGAACCAGTGGGGAGAATTGGATTGCTATTACCAGAAACTAGGCGTTTTAAGATAGAGGAATTATCTCTGGCCACACAAAATTTTAATATGAAGAATTTGATTGGAGAAGGAAAACTAGGAAAGGTTTATAAAGGTTTGCTTCAAGATGGAGTGCCTGTGGCTATCAAAAAGCGCCATAGAATCCCTAGTCAAGAATTTATAGATGAGGTGCGGTATCTCTCTTCTATTCAACACCAGAATCTGGTCACTCTTTTAGGCTATTGTCAGGAAAATAATCTACAATTTATTGTATATGAATATGTGACTAATGGATGTGTCTTCACACACTTTTATGGAGCTGGTGAAAAGACACATGAGAAGATTGAGTTCAAGCATTTACTTAAAATATCTTTAGGTGCAGCTAAAGGATTGGCTCATCTTCACTCTTTAAGCCCTTGTTTGTTGCACAAAAATTTCAAAACAACCAATGTTCTTGTGGATGAAAACTTCATTGCTAAGGTTGCAGATGCTGGAATTCATAACTTTTTGGGGAAATTCGAGATTGCAGGCTCATCTTCTCACGTAGCATCAGAACAGATATTTCTTGCTCCTGAAGTAAGAAAGTCCAGAAGATTTTCTGAGAAAAGTGATGTTTACAGCTATGGTATATTTTTGCTTGAATTGCTAAGTGGAAAGAAAGCATCAAAATCATTATTTTTGGGCTCAAATCAAAATCTAGTTGAATGGGTGCAAAGTATTGAACACTTTCACACTATGTTTAATATCATTGATCAAAGATTGGGAAGCAGCTTTACATTTGAAGGCATGGTAGATTTCATCTTGTTGGTAGTTCGATGTTTATATCCTTTAATTTATACGCGACCTACCATGAGTTATGTGGTAATGGAACTTGATCGAATCCTTGAAAAAGAAATAAACGTGACCAAGATCATGGATGAAGGAACCCTAACTGTGATTCTTGGAAGTCAGTTATTCAAAGAAACAACAAACAAGATATCATCGCCATAA 1158 0.3558 MSHTVEAILGGALGSLALFGIIMLLLWFFLFKQRCVSMTLENGLSIPSQVEPVGRIGLLLPETRRFKIEELSLATQNFNMKNLIGEGKLGKVYKGLLQDGVPVAIKKRHRIPSQEFIDEVRYLSSIQHQNLVTLLGYCQENNLQFIVYEYVTNGCVFTHFYGAGEKTHEKIEFKHLLKISLGAAKGLAHLHSLSPCLLHKNFKTTNVLVDENFIAKVADAGIHNFLGKFEIAGSSSHVASEQIFLAPEVRKSRRFSEKSDVYSYGIFLLELLSGKKASKSLFLGSNQNLVEWVQSIEHFHTMFNIIDQRLGSSFTFEGMVDFILLVVRCLYPLIYTRPTMSYVVMELDRILEKEINVTKIMDEGTLTVILGSQLFKETTNKISSP 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1567 385 Gene3D Phosphorylase Kinase; domain 1 49 150 - -
Lal13g1567 385 Gene3D Transferase(Phosphotransferase) domain 1 153 368 - -
Lal13g1567 385 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 378 - -
Lal13g1567 385 Pfam Protein tyrosine and serine/threonine kinase 79 293 IPR001245 GO:0004672|GO:0006468
Lal13g1567 385 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 1 378 - -
Lal13g1567 385 ProSiteProfiles Protein kinase domain profile. 78 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g1567 385 SUPERFAMILY Protein kinase-like (PK-like) 59 347 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1567 Lal-Chr13 15484306 15489232 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g1567 13 384 Receptor kinase-like Gene Family AT5G56890 32.090 1.19e-55 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXa Lal13g1567 PK_Tyr_Ser-Thr 5.7e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1567 - - gmx:100820178 491.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g1567 13 15484306 15489232 Lal13g1567 13 15484306 15489232 ECH