Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1566 ATGCAATCATTAAGCCAAATGTTACCACATACTCTTGCAGTAATATTAGGAGGAGCTATTGGAGCTTTGGCATTACTAGGGATGATTGTAATACTTCTATTGTTCTATTTGTTTCACCATAGAAGTGTTTCAATGAATTCAGAAAAAGGGTCATTTATTCTATCACAAGTGAGTAGAATTGGATTGCCATTACCAGAAACTAGGCGTTTTGAGATGGAAGAACTATCTTTGGCCACACAAAATTTTACTGTAAAAAATTTGATTGGAGAAGGAAAACTTGGGGATGTTTATAAAGGTTTGCTTCAAGATGGAGTAGTTGTAGCTATCAAAAAGCGTCATAGATTCCCAAGTCAAGAATTTATAGATGAGGTGCGGTATCTCTCTTCTATTCAACATCAGAATCTGGTCACTCTTTTAGGTTATTGTCAAGAAAATGATCTACAATTTCTTGTATATGAATATGTGACTAATGGATGTGTCTCCACACACTTTTATGGAGCTGGTGAACAGACACATGAGAATATTGAATTCAAGCATATACTTAAAATAGCTTTAGGTGCAGCTAAAGGATTGGCGCATCTTCACTCTTTAAGCCCTTGTTTCTTGCACAAAAATTTCAAAACAGCCAATGTTCTTGTGGATGAAAACTTCATTGCTAAGGTTGCAGATGCTGGAATTCATAACTTTTTGGGGAAATTTGAGATTGCAGGCTCATCTTCTCACGTGGCATCAGAACAGATATTTCTTGCTCCTGAAGTAAGAAAGTGTAGAGAATTTTCTGAGAAAAGTGATGTATATAGCTATGGCATATTTTTGCTTCAATTGTTAAGTGGAAGGGCACCATCAGAATCTGTATCTTCGGAATCAAATCAAAACCTAGTTGAATGGGTGGAAAGTATTGAACACCTTCAGAATATGTTTAGCATCATTGATCAGAGATTGGGATGTAGTTTTACATGTGAAGGCATGACAGAGTTCATCTTTTTGATAGTTCGATGTTTATATCATTTAATCGATTTGCGACCCACCATGAGCTATGTGGTAATGGAGCTTGATCGAATCCTTGAAAAAGAAATAATGGCCACTACAATCATGAGTGAAGGAACTATAAGTGTTATTCTTGGAAGTCAGTTATTCAAATCAACAACATAA 1152 0.3576 MQSLSQMLPHTLAVILGGAIGALALLGMIVILLLFYLFHHRSVSMNSEKGSFILSQVSRIGLPLPETRRFEMEELSLATQNFTVKNLIGEGKLGDVYKGLLQDGVVVAIKKRHRFPSQEFIDEVRYLSSIQHQNLVTLLGYCQENDLQFLVYEYVTNGCVSTHFYGAGEQTHENIEFKHILKIALGAAKGLAHLHSLSPCFLHKNFKTANVLVDENFIAKVADAGIHNFLGKFEIAGSSSHVASEQIFLAPEVRKCREFSEKSDVYSYGIFLLQLLSGRAPSESVSSESNQNLVEWVESIEHLQNMFSIIDQRLGCSFTCEGMTEFIFLIVRCLYHLIDLRPTMSYVVMELDRILEKEIMATTIMSEGTISVILGSQLFKSTT 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1566 383 Gene3D Transferase(Phosphotransferase) domain 1 157 371 - -
Lal13g1566 383 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 10 382 - -
Lal13g1566 383 ProSiteProfiles Protein kinase domain profile. 82 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g1566 383 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 10 382 - -
Lal13g1566 383 Pfam Protein tyrosine and serine/threonine kinase 84 348 IPR001245 GO:0004672|GO:0006468
Lal13g1566 383 Gene3D Phosphorylase Kinase; domain 1 45 154 - -
Lal13g1566 383 SUPERFAMILY Protein kinase-like (PK-like) 62 351 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1566 Lal-Chr13 15465934 15469306 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g1566 37 381 Trihelix Transcription Factor Family AT5G38560 35.180 2.51e-56 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXa Lal13g1566 PK_Tyr_Ser-Thr 3.6e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1566 - - gmx:100305436 454.521