Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1560 ATGGCTACAATCTCAGACACATGGAATCATCACCATAACTCAATGATTCCAAGCTTCCTCTATTCTCCTTCTTCATTACAGAATATGATAAATTCTTCTACAACTTCTATGCCAGAATCTTCTTTAGCTTCTTCTGGATTCATGGTTCCTTCTCCGAGCGAACCGGCTCGGAAAATCGAGATGTACTCACCAGCTTTCTATGGTGCTTGTGCTGTTGGTGGAACTCTCAGTTGTGGCCTTACTCATACTGCAGTTACTCCTCTTGATGTTATCAAATGTAATATGCAGATTGATCCAGCAAAATACAAGAGCACATCCTCTGGATTTGGAATAGTGTTTAAGGAGCAGGGTGTGAGGGGTTTTTATAGGGGTTGGGCACCAACATTTCTTGGTTATAGTGCACAAGGTGCCTTTAAATATGGACTATATGAGTATTTTAAGAAGTACTATTCTGATATTGCTGGCCCTGAATATGCAACAAAGTACAAGACTTTGATCTACCTTGCTGGTTCAGCATCTTCTGAGCTTATTGCAGATGTTGCACTTTGCCCATTAGAGGCCATCAAGGTCAGAGTTCAAACTCAACCTGGTTTTGCTAGAGGACTCTCTGATGGGCTACCAAAAATTCTTAAATCTGAAGGAGTCTTAGGATTGTACAGGGGAATTGTGCCTCTTTGGGGAAGACAGGTTCCATATACAATGATGAAGTTTGCATCTTATGAGACCATTGTTGAGATGATTTATAAGCATGCCATTCCTACACCTAAAGATGAATGTAGCAAAACTCTTCAACTTGGAGTTAGTTTTGGTGGTGGATATATAGCTGGAATATTATGTGCACTTGTGTCTCACCCTGCTGATAACCTTGTTTCTTTCCTCAACAACTCAAAAGGGGCAACAGTTGGTGATGCTATAAAGAACCTCGGATTATGGGGTCTCTTTACCCGCGGCCTCCCTCTTCGGATTCTTATGATTGGAACACTCACTGGATCTCAGTGGCTAATTTATGATTCATTCAAAGTTTTTGTGGGGCTGCCAACCACGGGTGGCGTTGCTCCTACTCCTGCTCCTACTCCGACTTCTGCCACTTAG 1092 0.4231 MATISDTWNHHHNSMIPSFLYSPSSLQNMINSSTTSMPESSLASSGFMVPSPSEPARKIEMYSPAFYGACAVGGTLSCGLTHTAVTPLDVIKCNMQIDPAKYKSTSSGFGIVFKEQGVRGFYRGWAPTFLGYSAQGAFKYGLYEYFKKYYSDIAGPEYATKYKTLIYLAGSASSELIADVALCPLEAIKVRVQTQPGFARGLSDGLPKILKSEGVLGLYRGIVPLWGRQVPYTMMKFASYETIVEMIYKHAIPTPKDECSKTLQLGVSFGGGYIAGILCALVSHPADNLVSFLNNSKGATVGDAIKNLGLWGLFTRGLPLRILMIGTLTGSQWLIYDSFKVFVGLPTTGGVAPTPAPTPTSAT 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1560 363 Gene3D Mitochondrial carrier domain 156 344 IPR023395 -
Lal13g1560 363 Gene3D Mitochondrial carrier domain 40 155 IPR023395 -
Lal13g1560 363 ProSiteProfiles Solute carrier (Solcar) repeat profile. 162 246 IPR018108 -
Lal13g1560 363 Pfam Mitochondrial carrier protein 165 250 IPR018108 -
Lal13g1560 363 Pfam Mitochondrial carrier protein 69 151 IPR018108 -
Lal13g1560 363 ProSiteProfiles Solute carrier (Solcar) repeat profile. 65 149 IPR018108 -
Lal13g1560 363 PANTHER PHOSPHATE CARRIER PROTEIN 10 356 - -
Lal13g1560 363 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 10 356 IPR044677 GO:0005315|GO:1990547
Lal13g1560 363 SUPERFAMILY Mitochondrial carrier 69 337 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1560 Lal-Chr13 15398607 15404536 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g1560 12 362 Chloroplast and Mitochondria Gene Families AT5G14040 71.003 0.0 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1560 K15102 - jre:109000282 555.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g1560 13 15398607 15404536 Lal13g1560 13 15398607 15404536 ECH
Lal10g0200 10 2646366 2649645 Lal13g1560 13 15398607 15404536 PCT
Lal13g1560 13 15398607 15404536 Lal10g0200 10 2646366 2649645 PCT