Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1556 ATGGAGAAGAACCTTCCAGAACATTCTAGTAGTTTTTCTCATAAGGATGATGACAACAACAACAACAACATTAGTGAGGATAATGTTGTTGTTGTTGTTGATGATGCTAGTGATGGTAAAGCATTGTCTGAACCTACTACAGAAAATGTTGAAAAAGATGAAGAAATTGTAAAAAAAGAAGAGGGTGAAAATTCAAATGAAGAAATCAAAAAAGCTCAAGAGGATGATGTTGTTGCTGATATTGAAGGAGAGGATAAAGAGAAAAAAGAAGAAGAAGTTGTTGCTGATGTTCCTCCCGAAACTCCTCCACCAAAATTGGAGAAAATTTCAGAAGACATTGATGCATTTATCATCAATGAAGGTACTATATCATCAAAGGAACCTAATTTCATTCACAGGTTCTTAGATCTTGTTGAAGAAAAGATCTCAGGCTATGACACAGGGAAAATCAAATGGGGTGAATCTAAGGAAGAAGATTCTTTATTGCTTGAAGCCATTGATCGCATTTCAAAGCTGATGAAACTTATACCTAATTCACCACCATTATCAACACAATCCGAAGAAGAAGAAACAGAAGAAATCAATGCAAAACAGGTAAATGACTCGCTTTTGAAGAATCGTGTTGGTGCAATTCATCAACAAGCAATGTCATATTTAGAAGACGAGTTTCGTGTGTTATTGGAGGAACCAAAGAACCACGTAACTGAACCAGAATCAAATAAACACGATTCAAAAGGAAAACAAGTAGTTGAACCACAACCATTGGAATCTGAACCTGGTTCAAATCCAGTTCCTAAATTCCCTAATTATGGAGATGAAACAATTTCAAATCTAAACAACATAGCAATGAAAATGATATCAGGTGGTTATCAATCAGAATGCTTCAACATGTATTTCATTTCAAGAAGGCACGGTTTCGAAGAAAACTTACATAAATTAGGGTTAGAGAAGATAAGCATCGACGAGGTTCATAAGATGCAATGGGAAGCATTGGAGAGAGAAATTCCAACATGGAACAACGTCTTCAAGGAATGCATTTCAATTTACTTCGCCGGAGAGAAGAAACTAGCGGAGGCAGTGTTTTCCGACAACCCAAACATGGCGGCGAGTGTATTTATGATGGTGTGTCAGCGCGTGGTGATTCAGCTTATTAATTTTGCGGAAGCGGTGGCGATGACGAAGCGTGCGGGGGAGAAGTTATTTAAATTGTTGGATATGTATGAAACTTTGAGGGATTTGATTGCAAATTTGGATAATTTGTTTCCTGAAGAATGTGTGGATGAGTTGAAAGCTGAAACGACGTCGGCTAAGTGTAGGCTTGGGGAATCATCTATTGTTATTTTTTGTGAATTGGAAAACTCTATCAAATCTGATATCGGTAAAACTCCCGTTGCCGGTGGTGCAGTTCATCCGCTCACTAGGTACATCATGAACTACTTGAGGTTAGCATGTGAATACAAGGACACATTGGAGGAAGTGTTCAAAGAGCATTCAAAGATAGAGCGTGCAGATTCAACTAGCAGGCCCCATTATGAAGCTGAGAACAAAAATGAGAATGAAAAGAGAGAGAATAATGATAACAATAAGGACAATGTTTCACCCTTTGCCGCACAACTAATGAGGGTAATGGAATTACTTGATACCAATCTAGAAGGTAAGGCAAAGTTGTACAAAGATGCTGCATTAAGCAGCATTTTCATGATGAACAATGGAAGGTACATAGTTCAAAAGATTAAAGGGTCACCAGATTTATATGAAGTTATGGGTGAAACATGGTATAGAAAGAGATCCTCAAATTTAAGGACATACCATAAGAACTATCAGATTGAAACATGGAGCAAAATATTAGGTTGCTTGAGCCCTAAGGGATTGAATGATAGTGGAAAAGTACAAAAGCCTGTTCTTAAGGAAAGGTTCAAGAGTTTCAATGCATTGTTTGAAGAGATACATAAGACACAAAGCACATGGGTTGTGAGTGATGAACAGCTTCAATCTGAGCTTAGGGTTTCAATTTCAGCACTTGTTATACCAGCTTATAGGTCATTTTTGGGAAGGTTTTCTCAGTATTTGGATCCAGGAAGACAAACAGGGAAGTATATAAAGTTTCAAGCTGAAGATATAGAGACTTATATTGATGAGTTGTTTGATGGAAACCCTCATCATCAATCCCTTGCAAAAAAGAGAGCATGA 2190 0.3749 MEKNLPEHSSSFSHKDDDNNNNNISEDNVVVVVDDASDGKALSEPTTENVEKDEEIVKKEEGENSNEEIKKAQEDDVVADIEGEDKEKKEEEVVADVPPETPPPKLEKISEDIDAFIINEGTISSKEPNFIHRFLDLVEEKISGYDTGKIKWGESKEEDSLLLEAIDRISKLMKLIPNSPPLSTQSEEEETEEINAKQVNDSLLKNRVGAIHQQAMSYLEDEFRVLLEEPKNHVTEPESNKHDSKGKQVVEPQPLESEPGSNPVPKFPNYGDETISNLNNIAMKMISGGYQSECFNMYFISRRHGFEENLHKLGLEKISIDEVHKMQWEALEREIPTWNNVFKECISIYFAGEKKLAEAVFSDNPNMAASVFMMVCQRVVIQLINFAEAVAMTKRAGEKLFKLLDMYETLRDLIANLDNLFPEECVDELKAETTSAKCRLGESSIVIFCELENSIKSDIGKTPVAGGAVHPLTRYIMNYLRLACEYKDTLEEVFKEHSKIERADSTSRPHYEAENKNENEKRENNDNNKDNVSPFAAQLMRVMELLDTNLEGKAKLYKDAALSSIFMMNNGRYIVQKIKGSPDLYEVMGETWYRKRSSNLRTYHKNYQIETWSKILGCLSPKGLNDSGKVQKPVLKERFKSFNALFEEIHKTQSTWVVSDEQLQSELRVSISALVIPAYRSFLGRFSQYLDPGRQTGKYIKFQAEDIETYIDELFDGNPHHQSLAKKRA 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1556 729 MobiDBLite consensus disorder prediction 233 249 - -
Lal13g1556 729 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 76 720 - -
Lal13g1556 729 MobiDBLite consensus disorder prediction 45 96 - -
Lal13g1556 729 MobiDBLite consensus disorder prediction 499 528 - -
Lal13g1556 729 MobiDBLite consensus disorder prediction 1 22 - -
Lal13g1556 729 PANTHER EXOCYST COMPLEX PROTEIN EXO70 76 720 IPR004140 GO:0000145|GO:0006887
Lal13g1556 729 Pfam Exo70 exocyst complex subunit 338 713 IPR046364 GO:0000145|GO:0005546|GO:0006887
Lal13g1556 729 MobiDBLite consensus disorder prediction 1 108 - -
Lal13g1556 729 SUPERFAMILY Cullin repeat-like 153 716 IPR016159 -
Lal13g1556 729 MobiDBLite consensus disorder prediction 499 531 - -
Lal13g1556 729 MobiDBLite consensus disorder prediction 233 268 - -
Lal13g1556 729 Gene3D Exocyst complex component Exo70 146 724 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1556 Lal-Chr13 15352872 15355651 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g1556 76 728 EXO70 exocyst subunit family AT5G13990 49.709 0.0 622
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1556 K07195 - gmx:100819960 789.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g1556 13 15352872 15355651 Lal24g1196 24 13214117 13216919 LSH
Lal25g1171 25 15157439 15159514 Lal13g1556 13 15352872 15355651 PCT
Lal13g1556 13 15352872 15355651 Lal25g1171 25 15157439 15159514 PCT