Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1545 ATGGAAATAGAAACCTCATCCTCTTCCTTATCACTCTTTGCTTCTTCTATTATCTTTCTCCTAATAATATTCCAACAAATATGCTGTGATGCTAAGCATCATCCACCATGTCCTTCTTCTTCCTGTGCCAAAATCACAAATATCACTTCTCCTTTTCGCCTCAAATCCTACCCAAACCACTGTGGCTACAAAACATTGGAATTAGATTGCGAGAAAAACGGGACCGTATTAACTTTCTTATCAGGAAAGTATTACGTTAACAACATAAATTACAGCAAATACACAATGAGTTTGAGTGATGCAGGTGTAGTGGAAGATGCAAGTTGCTCCTTTATACCTCGCTATTATTTACACACCGATTTCATAAACATTTATGGAAGTTTTTTGGTACAAATAATCCAACCTAGCAACCATAGCTATTCAACGATTGCATACTTAAATTGTACAAATCCAGTGAAGGATGATCGACGATATGTGAAAGTGGATATGAGTCTTAGTTGTGGATTCGGAGAACACGTGTATGCAGTTTGGGATCAATGGATGGATGATTCGAAATCGATGATGACGAAGAGTGATATTAGGGTTGGGTGTGGTTTGATGATAGCAACATCAACAAGTAAAAGGTTGTCGGGTGTTGAATTAAAAGGTGAGATATCATATGGTGAAATTCATAAGTGGATGGTTGAGGGATTTGAGGTATCATGGTTGGGTGTGATTTGTGATCAACTATGTGGAACCATAACATGTGAGATTGTGAATGAATCCAATGGAGAAGTCAAATGTTTCAATTATTCAAAACATTGTGGATGGTCATATGCTACAAGCGACAATTGCGGTATTATTAACATAACTCATAATGTTACTTTCTCTATGTCTTCATATATTATACATTGTTATATCATCTACTATTGTTTGGGAATTGTCCAACAAATCAGTGATTACATTCGAGCTTATCTGAGTGGCGTTATAATTGGAATATACAGGAGATTTAGCACAAAGGATGATTTGGGCAAACCATTTCAGTATTTTACAGATGGAGGAATATTCATGGGACAATATATTCTACCATCTTTGATTGCAATAAGATATTCATTTGGAGTTGTACTTATGCTTATTTTATTAATCTATAAATGGAGAAGAAGACATTTATCAATGTATGAAGAGATTGAAAACTTTTTGCTAGACAACAATCTAAGTCCCATTAGGTATGAATACAAAGAAATCAAGAAGATGAGTGGAAGTTTCAAAGTGAAATTAGGTCAAGGAGGCTATGGTTCAGTATATAAAGGAAAACTACGAAGTGGTCCTGATGTAGCAATAAAGATGTTGAATAATAAATTCAATTCTAATGGACAAGACTTTATTAATGAAGTTGCTACCATTGGAAGAATACATCATGTTAATGTGGTACGTCTTGTTGGATATTGTGTTGATGGAACAAAACGTGCCCTAGTCTATGAATTCATGCCTAATGGATCATTGGATAAATACATATTCTCTAATGAAGGCATTGTTTCATTAAGTTATGAAAAAATATATGAAATATCTCTTGGAATAGCTCATGGGATTTCGTATCTACATCAAGGTTGTGATATGCAAATTCTACATTTTGATATAAAGCCTCATAATATTCTTCTAGATGAAAACTTCATCCCAAAAGTTTCTGATTTTGGACTTGCAAAGTTATATCCTGTAGATGATAGCATTGTTACTTTAACTGGGGTAAGAGGAACTTTGGGATACATGGCTCCTGAATTGTTTTATAGAAATGTTGGAGGAGTATCTTATAAGGTTGATGTGTATAGTTTTGGTATGCTTTTGATGGAAATGACTAGCAAGAGGAAGAACTCAAATCCAAATGCAGAACATTCAAGCCAAGTTTACTTCCCCTTTTGGATATATGACAAATTTAATGAAGAAAAAGATATTGAAATGGAAGATTTATGTGAGGAGGAAGATAGGAATGTAGCAAAAAAGATGTTCATTGTTGCTCTATGGTGTATACAGTTAAAACCTAGTGATCGTCCTTCAATGACCAAGGTTGTAGAGATGCTTGAAGGGGATATTGAAAGCCTTCAAATGCCTCCAAAGCCTTCTTTCTATCCGCATGATGATGAAATCAACACTGACCAAACATCATGGACTGATTCCTATAGTTCTAATAGTTATATGCAAAGTCATAACTAA 2187 0.3461 MEIETSSSSLSLFASSIIFLLIIFQQICCDAKHHPPCPSSSCAKITNITSPFRLKSYPNHCGYKTLELDCEKNGTVLTFLSGKYYVNNINYSKYTMSLSDAGVVEDASCSFIPRYYLHTDFINIYGSFLVQIIQPSNHSYSTIAYLNCTNPVKDDRRYVKVDMSLSCGFGEHVYAVWDQWMDDSKSMMTKSDIRVGCGLMIATSTSKRLSGVELKGEISYGEIHKWMVEGFEVSWLGVICDQLCGTITCEIVNESNGEVKCFNYSKHCGWSYATSDNCGIINITHNVTFSMSSYIIHCYIIYYCLGIVQQISDYIRAYLSGVIIGIYRRFSTKDDLGKPFQYFTDGGIFMGQYILPSLIAIRYSFGVVLMLILLIYKWRRRHLSMYEEIENFLLDNNLSPIRYEYKEIKKMSGSFKVKLGQGGYGSVYKGKLRSGPDVAIKMLNNKFNSNGQDFINEVATIGRIHHVNVVRLVGYCVDGTKRALVYEFMPNGSLDKYIFSNEGIVSLSYEKIYEISLGIAHGISYLHQGCDMQILHFDIKPHNILLDENFIPKVSDFGLAKLYPVDDSIVTLTGVRGTLGYMAPELFYRNVGGVSYKVDVYSFGMLLMEMTSKRKNSNPNAEHSSQVYFPFWIYDKFNEEKDIEMEDLCEEEDRNVAKKMFIVALWCIQLKPSDRPSMTKVVEMLEGDIESLQMPPKPSFYPHDDEINTDQTSWTDSYSSNSYMQSHN 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1545 728 Gene3D Transferase(Phosphotransferase) domain 1 489 695 - -
Lal13g1545 728 Pfam Wall-associated receptor kinase galacturonan-binding 37 100 IPR025287 GO:0030247
Lal13g1545 728 ProSiteProfiles Protein kinase domain profile. 413 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g1545 728 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 12 711 - -
Lal13g1545 728 SMART serkin_6 413 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g1545 728 Gene3D Phosphorylase Kinase; domain 1 391 488 - -
Lal13g1545 728 Pfam Protein kinase domain 416 683 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g1545 728 ProSitePatterns Protein kinases ATP-binding region signature. 419 441 IPR017441 GO:0005524
Lal13g1545 728 PANTHER RUST RESISTANCE KINASE LR10-RELATED 12 711 IPR045874 GO:0004672
Lal13g1545 728 SUPERFAMILY Protein kinase-like (PK-like) 400 686 IPR011009 -
Lal13g1545 728 CDD STKc_IRAK 419 687 - -
Lal13g1545 728 ProSitePatterns Serine/Threonine protein kinases active-site signature. 534 546 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1545 Lal-Chr13 15234159 15239232 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g1545 402 713 Receptor kinase-like Gene Family AT5G38280 48.758 3.32e-101 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Lal13g1545 Pkinase 1.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1545 - - lja:Lj0g3v0275229.4 811.601