Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1514 ATGGGGAGGAATGGAAATTGGTTTTCTTCTGTGAAGAAAGTTCTCAGCCCTGAGCCAAAGGAGAGGAAAGATCAGAAGTCAATAAAATCGAAGAAGAAATGGTTTGGGAAGCAAAAATTGCAGACTTCAGAGGCATGCTCAGAAACCGATAAAGCAACTCCTCTTCCTGTACCTGAGGAGATTATTTTAACTCATATCGATAACGAAAACAGTAATGATCATGTTGTTGAAGTTGCAACTGTCTCGGAGGCAGAGGAACCTGTTCTTGCTGTTCAGACAGAAGTTGCTGAGGTTCAAGCCACTACTGCATTTGTTCTGTTTGCTGGTAAACCAAAGGATGAATTGGCAGCAATGAAGATTCAAAAAGCTTTTCGGGGATACTTGGCAAGAAGAGCATTGCGTGCTTTAAAGGGGCTGGTCAGGTTGAAGTCACTGATGGAAGGGCAAGTTGTAAAACGCCAAGCCATCAGTACCCTTCGCTCTATGCAGACTTTTGCTCATTTACAATCTCAGATTCATTCTAGGAGGCTCAGGATGTTGGAGGAGACTCAAGCACTGCAGAAACTGCTCTTGCAGAAGCACGCAAAAGAGCTAGACAGCGTACGACTTGGAGAGGAATGGGATGATAGCTTACAATCCAAGGAACAAATTGAAGCCAAGTTACTAAGCAAGTATGAGGCTGCAACAAGAAGAGAAAGAGCACTGGCTTATTCATACTCTCATCAGAAAAATGGGAAGAATTCATCTAGATCTATAAATCCAATGTTCATCGATCCAACCAATCCTTCATGGGGTTGGAGTTGGTTGGAACGATGGACAACAGCCCGACCTTGGGAGAGCCATAGTCTGATGGAGAAAGAAAAAAACGATAATTCTTATGTAAAAAATCCAACCCGAGGCATTACGAATGCTGAAATCAGCAAATCATTTGCTCGTTTCCAGCTCAATTCCGAAAAGCATTCTCCAACAGCCAGCCAAACTCCAGCCTCTCCTAGATTTCAGTCTCATTCTAATCCTCCCAAGCCAGCTTCTACAGCTATTGCTAAGAAAATTAAGAAGGCGATCCCGAAGGAAAATTCGGTCATCGATGATGACACCAAAAGCATGATCAGTATGCAATCAGAGCAGTTCCGGAGGCACTCCATTGCAGGGTCAACAATGAGAGATGATGAAAGCCTTGCAAGTTCTCCTGCACTTCCAAGTTATATGGTACCAACTAGATCTGCAAAAGCTAAGTCCAAGATGCAAACTACATTGGCTGCAGATAATGGCACACTTCAGAAAGTGACTGTTGGGACTGCAAAGAAAAGGCTCAGTTTCCCAGCATCACCTGCCAGGCCAAGGCGGCATTCGGGTCCACCGAAGGTCGAAAGCGGCTTGATTGCTGAAATTACTGTGGGCAATGGTGTGGCTGGTTGA 1419 0.4447 MGRNGNWFSSVKKVLSPEPKERKDQKSIKSKKKWFGKQKLQTSEACSETDKATPLPVPEEIILTHIDNENSNDHVVEVATVSEAEEPVLAVQTEVAEVQATTAFVLFAGKPKDELAAMKIQKAFRGYLARRALRALKGLVRLKSLMEGQVVKRQAISTLRSMQTFAHLQSQIHSRRLRMLEETQALQKLLLQKHAKELDSVRLGEEWDDSLQSKEQIEAKLLSKYEAATRRERALAYSYSHQKNGKNSSRSINPMFIDPTNPSWGWSWLERWTTARPWESHSLMEKEKNDNSYVKNPTRGITNAEISKSFARFQLNSEKHSPTASQTPASPRFQSHSNPPKPASTAIAKKIKKAIPKENSVIDDDTKSMISMQSEQFRRHSIAGSTMRDDESLASSPALPSYMVPTRSAKAKSKMQTTLAADNGTLQKVTVGTAKKRLSFPASPARPRRHSGPPKVESGLIAEITVGNGVAG 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1514 472 MobiDBLite consensus disorder prediction 1 35 - -
Lal13g1514 472 PANTHER IQ-DOMAIN 5-RELATED 1 464 - -
Lal13g1514 472 MobiDBLite consensus disorder prediction 432 459 - -
Lal13g1514 472 MobiDBLite consensus disorder prediction 316 344 - -
Lal13g1514 472 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 1 464 - -
Lal13g1514 472 MobiDBLite consensus disorder prediction 316 342 - -
Lal13g1514 472 SMART iq_5 112 134 IPR000048 GO:0005515
Lal13g1514 472 Pfam IQ calmodulin-binding motif 116 134 IPR000048 GO:0005515
Lal13g1514 472 ProSiteProfiles IQ motif profile. 113 141 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1514 Lal-Chr13 14815262 14818911 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g1514 1 471 IQD Protein Family AT5G03040 48.548 6.31e-134 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1514 - - gmx:100799058 634.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g1514 13 14815262 14818911 Lal13g1514 13 14815262 14818911 ECH