Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1507 ATGTCTTCACAAGATAACTCAAATCGAAACTGGTCCCTCCAAGACTTCGACATTGGTAAACCTCTCGGTAGGGGCAAATTCGGAAGAGTCTACGTCGCCAGAGAACGCAAAAGCAAATATGTTGTAGCACTGAAGATTATATTTAAGGAACAAATTAAGAAGCACAAAATTGATCATCAACTAGTTAGAGAAATGGAGATTCAGACAAGTCTTCGGCACCCGAATATTTTGCGTCTCTATGGTTGGTTCCATGATGATGAACGTGTTTTCTTGATTCTTGAGTATGCTCATAATGGTGAGCTTTATAAGGAGTTAAGGAAACAAGGCCATCTCTCTGAGAATCATGCTGCCACTTATATTTTGAGCCTCACAAAGGCATTGGCGTATTGTCATGAGAAGCATGTTATTCATAGGGATATCAAGCCTGAAAATTTGTTACTTGACCATGAGGGACGTCTTAAAATTGCAGATTTTGGTTGGTCTGTGCAGTCTTCTAACAAAAGACATACAATGTGTGGAACATTGGATTATTTAGCACCCGAAATGGTCGAAAACAAAGCTCATGACTATACAGTTGATAACTGGACTCTGGGTATCCTTTGTTATGAATTCCTATATGGTGTTCCTCCTTTTGAGGCTGAGAGTCAACTTGATACCTTCAGAAGGATAATAAAGGTTGACCTAAGCTTCCCTTCCACCCCTTCCATTTCTTTGGATGCCAAAAATCTGATTAGCCGGCTCCTGGTGAAAGACTCGTCACGAAGACTCCCGCTTCAAAAAATAGTGGAGCATCCTTGGATACTAAAAAATGCAAATCCTATGGGTATCTGCAATTAG 837 0.4038 MSSQDNSNRNWSLQDFDIGKPLGRGKFGRVYVARERKSKYVVALKIIFKEQIKKHKIDHQLVREMEIQTSLRHPNILRLYGWFHDDERVFLILEYAHNGELYKELRKQGHLSENHAATYILSLTKALAYCHEKHVIHRDIKPENLLLDHEGRLKIADFGWSVQSSNKRHTMCGTLDYLAPEMVENKAHDYTVDNWTLGILCYEFLYGVPPFEAESQLDTFRRIIKVDLSFPSTPSISLDAKNLISRLLVKDSSRRLPLQKIVEHPWILKNANPMGICN 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1507 278 PIRSF ILK 3 269 - -
Lal13g1507 278 SMART serkin_6 16 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g1507 278 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 6 276 IPR030616 GO:0004672
Lal13g1507 278 ProSitePatterns Serine/Threonine protein kinases active-site signature. 135 147 IPR008271 GO:0004672|GO:0006468
Lal13g1507 278 Pfam Protein kinase domain 18 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g1507 278 CDD STKc_Aurora 15 268 - -
Lal13g1507 278 SUPERFAMILY Protein kinase-like (PK-like) 11 271 IPR011009 -
Lal13g1507 278 Gene3D Phosphorylase Kinase; domain 1 4 99 - -
Lal13g1507 278 ProSiteProfiles Protein kinase domain profile. 16 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g1507 278 ProSitePatterns Protein kinases ATP-binding region signature. 22 49 IPR017441 GO:0005524
Lal13g1507 278 Gene3D Transferase(Phosphotransferase) domain 1 100 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1507 Lal-Chr13 14754055 14756769 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g1507 16 272 CBL-interacting serine-threonine protein kinases AT5G25110 39.544 6.68e-62 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Lal13g1507 Pkinase 1.2e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1507 K08850 - gmx:100800111 494.967