Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1506 ATGAGCGTCATCGATATTCTAACCAGAGTCGATTCCATTTGCAACAAGTACGACAAATACGATGTCGAGAAGCTCAATGACGCCAAAATCTCCGGCGACGATGCCTTTTCAAGACTCTACGCCGCCGTAGACGATGACATCGCCGCCTTGACTCAAAAAGCAGAAATTGCTTCAAGGGAGAAAGGGAAGGCATCTGCTGTAGCGATCAACGCCGAGATTCGACGTACCAAGGCTCGATTGTTGGAGGAGGTTCCCAAATTACAGAGGTTGGCTGTTAAAAAGGTGTGCAGTATTGATAGAATGATAGGTGTTGTTGACAATGTCTGTATTGCAGTATTGGGCAGCACAATGCGCCCCATCAGCAAAAGGTGTGGCATACCCTTGAGGAAGTCCATAGAAAGACCAGTCGACCACAAGGATTCCTTGTGGACAAATCTGTTTACCTTTCTCTACGTAAAGGGGCTTTCCTCACAAGAATTCGCTGCTCGTAATGATTTGGCTCTTGCATTGCCGGAGAGGATCCAAGCTATCCCAGATGGGACTCCTGCTGCACCCAAACAAACTGGAGGCTGGTCAGGGGGAGCTTCTGACTCGCATCCTGAAATTAAATTTGATTCAAATGGCCGTTTTGACGATGAATTCTTCCAACAATCTGAGCAATCAAGTAAGTTCAGGCAGGAGTATGAAATGCGTAAAATGAAACAGGCAAGTTTGGATGTGATTGCAGAAGGACTGGGTACATTGCACGAAATGGCACGTGATATGAATGAGGAACTGGATAGACAAGTTCCGCTGATGGATGAGATTGACAATAAGGTTGACAAGGCATCCTCTGACCTTAAGAATACCAATGTCAGACTTAAACACACAGTGAACCAGCTTCGATCCAGTCGAAACTTCTGTATTGATATTATTTTGTTGATAATAATTCTGGGAATTGCTGCCTACTTATACAATGTTCTAAAGAATTGA 972 0.4465 MSVIDILTRVDSICNKYDKYDVEKLNDAKISGDDAFSRLYAAVDDDIAALTQKAEIASREKGKASAVAINAEIRRTKARLLEEVPKLQRLAVKKVCSIDRMIGVVDNVCIAVLGSTMRPISKRCGIPLRKSIERPVDHKDSLWTNLFTFLYVKGLSSQEFAARNDLALALPERIQAIPDGTPAAPKQTGGWSGGASDSHPEIKFDSNGRFDDEFFQQSEQSSKFRQEYEMRKMKQASLDVIAEGLGTLHEMARDMNEELDRQVPLMDEIDNKVDKASSDLKNTNVRLKHTVNQLRSSRNFCIDIILLIIILGIAAYLYNVLKN 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1506 323 Gene3D - 236 299 - -
Lal13g1506 323 Coils Coil 266 286 - -
Lal13g1506 323 PANTHER SYNTAXIN-73 1 97 - -
Lal13g1506 323 PANTHER SYNTAXIN-73 147 319 - -
Lal13g1506 323 PANTHER SYNTAXIN 147 319 IPR045242 -
Lal13g1506 323 PANTHER SYNTAXIN 1 97 IPR045242 -
Lal13g1506 323 CDD SNARE_Qc 238 289 - -
Lal13g1506 323 ProSitePatterns Syntaxin / epimorphin family signature. 234 273 IPR006012 GO:0005484|GO:0006886|GO:0016020
Lal13g1506 323 Pfam SNARE domain 265 314 IPR000727 -
Lal13g1506 323 SUPERFAMILY SNARE fusion complex 235 288 - -
Lal13g1506 323 MobiDBLite consensus disorder prediction 177 203 - -
Lal13g1506 323 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 228 290 IPR000727 -
Lal13g1506 323 SMART tSNARE_6 223 290 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1506 Lal-Chr13 14748023 14753096 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g1506 1 322 SNARE and Associated Proteins AT3G09740 54.012 7.55e-107 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1506 K08506 - mnt:21407151 328.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g1506 13 14748023 14753096 Lal13g1506 13 14748023 14753096 ECH