Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1503 ATGAAGATTTCTTGTTTTTTTCCCTGTTACTCAATATCAGTTAATGAACAAAACAACAACGATTATATAGAGGAAGTGAATGATGGAAACTTTCGCGTGTTCACTTATAAAGAATTGAAATCTGCCACTGATAATTTTCATGCCTCAGAAAAGGTTGGAGAAGGAGGCTTTGGTTCTGTCTATAAGTTGCGGCTACTGCGATTATGGCCATTGCAATGCGGATTACGGCTATTGCGAGTCACACCGCAATTGCGGTGTGATGTGGTTGCAGCGGGGAGGCTTAGGGATGGTACTTTTGTGGCAGTAAAAGTGCTTTCGGTTGAGCTGGATTCGATGCGAGGAGAAAGTGATTTTGTGGCAGAATTGGCCACACTCTCAAACATAAAGCACCAAAATCTAGTAGGTCTTAGAGGGTGTTGTGTGGAAGGAACTCACAGATATTTAGTTTATGATTACATGGAAAACAACAGTCTCCACAACACTTTCTTAGGTTCAGAAGAGGGTAGGATAAGATTCAGCTGGTTATCAAGGAAGCATGTATCCATAGGTGTGGCTAATGGGCTTTTGTTTCTACATGAGGAGCTTAAACCTCATATTGTGCATAGAGATATAAAAGCCAAAAACATACTTCTTGATCGAAATTTTACACCAAATATTTCAGATTTTGGGTTAGCAAAGCTATTGAGAGATGAAGTTTCTTACATCAGTACACGAGTTGCAGGGACATTGGGTTATCTTGCTCCAGAATATGCCAGTACTGGACAAGTGACAAGAAAATCAGATGTTTATAGCTTTGGGGTATTATTGTTACAAATTGTTAGTGGTCTAACAGCTGTAGATGCTTATCAAGAAAGTGAACGGTTCATTGTAGAGAAGGCGTGGGCAGCATATGAAGCTAATGATCTCATAAGAATGGTGGATCCTGTTCTGAATATGAACTATTCTGTGGATGAAGCCTTAAAATTCCTAAAAGTTGGGTTGCTTTGCGTGCAAGAAAAAGCTAACCTTAGACCAAGAATGTCTGAGGTTGTTGAGAAATTGACCAACATTGTTGACATGAAAGACGTTCACATTACAAAACCAGGCCTTGTTGCTGATCTAATGACCATTAGAATAAAACAAAAAATGGAAATGAACAACTCATCAGCATCAAATCAGGAATCAAATTCCATTGGAGGAACATTTAGTAGCTCTACTTGGAGCATGTCCAATCTTGCTAGATAA 1224 0.3922 MKISCFFPCYSISVNEQNNNDYIEEVNDGNFRVFTYKELKSATDNFHASEKVGEGGFGSVYKLRLLRLWPLQCGLRLLRVTPQLRCDVVAAGRLRDGTFVAVKVLSVELDSMRGESDFVAELATLSNIKHQNLVGLRGCCVEGTHRYLVYDYMENNSLHNTFLGSEEGRIRFSWLSRKHVSIGVANGLLFLHEELKPHIVHRDIKAKNILLDRNFTPNISDFGLAKLLRDEVSYISTRVAGTLGYLAPEYASTGQVTRKSDVYSFGVLLLQIVSGLTAVDAYQESERFIVEKAWAAYEANDLIRMVDPVLNMNYSVDEALKFLKVGLLCVQEKANLRPRMSEVVEKLTNIVDMKDVHITKPGLVADLMTIRIKQKMEMNNSSASNQESNSIGGTFSSSTWSMSNLAR 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1503 407 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 89 396 - -
Lal13g1503 407 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 5 62 - -
Lal13g1503 407 Gene3D Phosphorylase Kinase; domain 1 30 72 - -
Lal13g1503 407 Pfam Protein tyrosine and serine/threonine kinase 49 347 IPR001245 GO:0004672|GO:0006468
Lal13g1503 407 SMART serkin_6 46 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g1503 407 Gene3D Phosphorylase Kinase; domain 1 86 153 - -
Lal13g1503 407 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
Lal13g1503 407 ProSiteProfiles Protein kinase domain profile. 46 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g1503 407 SUPERFAMILY Protein kinase-like (PK-like) 30 360 IPR011009 -
Lal13g1503 407 Gene3D Transferase(Phosphotransferase) domain 1 154 364 - -
Lal13g1503 407 PANTHER RECEPTOR-LIKE KINASE 5 62 - -
Lal13g1503 407 PANTHER RECEPTOR-LIKE KINASE 89 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1503 Lal-Chr13 14695651 14698388 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g1503 33 366 Receptor kinase-like Gene Family AT1G56120 43.582 1.48e-83 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lal13g1503 PK_Tyr_Ser-Thr 1.7e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1503 - - gmx:100813945 548.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g1503 13 14695651 14698388 Lal13g1503 13 14695651 14698388 ECH