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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Lal13g1500
ATGATTGCATTTATGGAATCAAAGGAGAAAGCAAAAAAGGTTGAGAAGTGTTTGGATCCTCAACTATGGCATGCTTGTGCAGGTGGAATGGTGCAGATGCCAGAGTTGAACAGCAAGGTTTATTATTTCCCTCAGGGTCATGCTGAACATGCATGTGGTTCAGTGAATTTCAGTACTTGCCCCAAGGTTCAACCTTTAGTTCTTTGCAGAGTTGAAGCTATCAAATACATGGCTGATCCTGAAACTGATGAGGTATATGTCAAACTAAGGCTTGTTCCTGTAAATAGAAATGATGCTAATTATGGGTTTGATTGTATTGGAGGGGTAAATGGATCTGAGAATCAAGATAAGCCTGCTTCTTTTGCAAAGACCTTAACTCAATCCGATGCGAACAATGGTGGAGGGTTTTCTGTTCCTAGGTATTGTGCTGAGACAATTTTCCCCCGTTTGGACTATTCGGCTGCACCTCCGGTTCAAAACATTCTGGTCAAAGATGTGCACGGCGAGACATGGAAATTGAGGCACATTTATAGGGGCACTCCAAGGCGGCATCTGTTGACTACCGGGTGGAGTAATTTTGTCAATCATAAGAAGCTTGTTGCTGGGGACTCAATTGTGTTTTTGAGAGCGGAAAATGGGGATCTATGCGTTGGAATTCGGAGAGCGAAGAAGGGTATGGTTGGTGGAGCTGAGGCTTCATCAGGGTGGAACCCTGCTGGTGGGAACTCTACTGTGCCTTATGGTGGACTTGCAGCATATTTGAGAGGAGATGATGTGAATAGTCTCATGAGAAATGGTAACAATAGGAATGGTTTGAATTTGAACCCGCCGAGATTGAGTATGATGGGAAATGGAAATGTGATGCCGGAAGCAGTTATTGAAGCTGTTACTCTTGCTGCAAATAAGCAATCTTTTGAGGTTGTGTACTACCCTCGGGCTAGTACTCCGGAATTTTGTGTGAAGGCCTCTTTAATTGAAGCAGCATTGCAGATTAGGTGGTGTTCTGGAATGAGATTCAAGATGCCCTTCGAAACTGAGGACTCCTCGCGGATTAGCTGGTTTATGGGAACCATATCTTCAGTTCAGGTTGCTGATCCCCTTGGCTGGCCTACTTCACCTTGGAGACTTCTCCAGGTTACATGGGATGAACCAGATTTACTTCAAAATGTGAGAAAAGTGAACCCATGGCTAGTTGAATTGGTATCTAACATGCCAGCTTTCCCTCTTTCTCCTTTCTCACCGCCACGGAAGAAATTTAGATTGCCCGAACACCCAGATTTCCCCCTTGATGGCCACATTCCTCCACCAACATTCTCCGGTAATCTTCTAGTTCCCAACAACAACCTATTCAGATATCCACCCGATAATTCTCCTGCTGGCATGCAGGGAGCCAGGCATGCTCGTTATGGTCTATCCTTACCGGATTTCCACCTCAATAGACTGCAGTCAGGTCTAATACCTTTCAGTGTCCCACCTCCTGATCACGCTGCTACACCAATGAGGGTCTCGACAAACCTATCATTACAAAAGCCTGTTACGAGTGAGAATGTATCTTGTTTATTATCTATGGAAAATTCTACTCAATCTACTAGGAAACTGGATGGTGTAAAGACACCATCCCAGCTTGTACTTTTCGGCCAAAAAATTCTCACTGAACAGCAAATCTCTTTGAGTAACTCCGGAGACATGGTCTCCGTTGATCGAAATGGATCTGCTCTCGATCATCATGGCGTAGAAGAACGCTCCTCTTCTGGGAGGTTCCCATGGTGTAAGGATAACCGCCAAGAAACTGAGGCCAGTTTGGAGATTCGTCATTGTAAAGTTTTTATGGAATCGGAAGATGTAGGCCGGACTATGGACCTCTCATTGCTACGATCTTATGATGAACTGTACAGAAATCTGGCAGACATGTTTTGCATAGAAAAGTTTGAGATGCTAAATCATGTGCTCTACCGCGATATAACAGGGGTAGTCAAACAGATTGGAGACGAGCCATTCAGTGACTTCACAAAAACAGTTAGGAGGTTGACTATTGTAATGGATTCCAGCAGTGACAATGTAGGAGTGTAA
2070
0.444
MIAFMESKEKAKKVEKCLDPQLWHACAGGMVQMPELNSKVYYFPQGHAEHACGSVNFSTCPKVQPLVLCRVEAIKYMADPETDEVYVKLRLVPVNRNDANYGFDCIGGVNGSENQDKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAAPPVQNILVKDVHGETWKLRHIYRGTPRRHLLTTGWSNFVNHKKLVAGDSIVFLRAENGDLCVGIRRAKKGMVGGAEASSGWNPAGGNSTVPYGGLAAYLRGDDVNSLMRNGNNRNGLNLNPPRLSMMGNGNVMPEAVIEAVTLAANKQSFEVVYYPRASTPEFCVKASLIEAALQIRWCSGMRFKMPFETEDSSRISWFMGTISSVQVADPLGWPTSPWRLLQVTWDEPDLLQNVRKVNPWLVELVSNMPAFPLSPFSPPRKKFRLPEHPDFPLDGHIPPPTFSGNLLVPNNNLFRYPPDNSPAGMQGARHARYGLSLPDFHLNRLQSGLIPFSVPPPDHAATPMRVSTNLSLQKPVTSENVSCLLSMENSTQSTRKLDGVKTPSQLVLFGQKILTEQQISLSNSGDMVSVDRNGSALDHHGVEERSSSGRFPWCKDNRQETEASLEIRHCKVFMESEDVGRTMDLSLLRSYDELYRNLADMFCIEKFEMLNHVLYRDITGVVKQIGDEPFSDFTKTVRRLTIVMDSSSDNVGV
689
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Lal13g1500
689
ProSiteProfiles
B3 DNA-binding domain profile.
121
223
IPR003340
GO:0003677
Lal13g1500
689
Gene3D
-
600
687
-
-
Lal13g1500
689
SUPERFAMILY
DNA-binding pseudobarrel domain
116
223
IPR015300
-
Lal13g1500
689
ProSiteProfiles
PB1 domain profile.
603
686
IPR000270
GO:0005515
Lal13g1500
689
Pfam
Auxin response factor
295
378
IPR010525
GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lal13g1500
689
Pfam
B3 DNA binding domain
121
222
IPR003340
GO:0003677
Lal13g1500
689
Gene3D
-
332
405
-
-
Lal13g1500
689
CDD
B3_DNA
120
221
IPR003340
GO:0003677
Lal13g1500
689
Gene3D
-
119
223
IPR015300
-
Lal13g1500
689
PANTHER
AUXIN RESPONSE FACTOR 4-RELATED
6
680
IPR044835
GO:0003677|GO:0006355|GO:0009725
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Lal13g1500
Lal-Chr13
14608534
14611815
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Lal13g1500
14
689
B3 DNA Binding Superfamily
AT4G30080
56.286
0.0
709
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
B3-ARF
Lal13g1500
B3
4.7e-21
CL0405
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Lal13g1500
-
-
gmx:100796522
1043.11
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Lal13g1500
13
14608534
14611815
Lal12g0158
12
1119401
1122383
ECH
Lal13g1500
13
14608534
14611815
Lal24g0126
24
899001
902404
ECH
Lal13g1500
13
14608534
14611815
Lal13g1500
13
14608534
14611815
ECH
Lal13g1500
13
14608534
14611815
Lal9g0276
9
1721226
1725148
ECH
Lal13g1500
13
14608534
14611815
Lal8g0149
8
1013683
1017579
ECH
Lal13g1500
13
14608534
14611815
Lal10g1230
10
18631524
18635382
ECH
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