Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1489 ATGATACATTGTGCTGCTTGTGACTACAGCTATAAATCCCTGCATGAAAGTTGCTCCAATATCCCAAGTGATGTTCCAAAGGGTCACTTGGTTGTGTATGTAGGTTCCAACCACAAGAGATTTGTGATCAAAGTTACATTGCTATGTCATCCACTCTTCAAGGCCTTGTTGGATCAAGCACAAGAAGAATTTGATTTCATTGCGGATTCTAAACTTTGCATTCCTTGTGATGAACATCTCTTCCTCAGTGTCATTAGATGTGCAAGCTCTCCAAACAATGAAAGGTACCACTTATAA 297 0.3973 MIHCAACDYSYKSLHESCSNIPSDVPKGHLVVYVGSNHKRFVIKVTLLCHPLFKALLDQAQEEFDFIADSKLCIPCDEHLFLSVIRCASSPNNERYHL 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1489 98 Pfam Auxin responsive protein 16 87 IPR003676 GO:0009733
Lal13g1489 98 PANTHER AUXIN-RESPONSIVE FAMILY PROTEIN 13 95 - -
Lal13g1489 98 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 13 95 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1489 Lal-Chr13 14399966 14400328 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g1489 8 95 Calmodulin-binding Proteins AT4G34750 43.011 8.58e-20 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1489 K14488 - gmx:100812927 158.688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g1489 13 14399966 14400328 Lal13g1489 13 14399966 14400328 ECH