Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1486 ATGAAGTGTTTTGCGTTCTACTATGGGCAGAAGAAGGATGATCCAAAGATCTTGCAGTCATTGTCGGGTCTGTCGGAATTGAATTCTCAGAATGTATCAGACACTGGTTCAGATTCCCTCAGGAGGAATGCATTTCCTAGTTTGTCCCAAAGACCAAGCAACCTGAAAGTATTTACTCTATCTGAACTGAAATCAGCTACAAAGAATTTCAGCCGCTCCGTTATGCTTGGGGAGGGCGGATTCGGGTGTGTCTACAAGGGATTGATCAATTGTGTGGACGATCCTTCCAGAAAAATTGAAGTTGCAGGTCATAAGGAATGGGTAACTGAAGTGAATGTTCTGGGTATTGTTGAGCATCCCAATCTTGTGAAACTAGTGGGATATTGTGCCGATGATGATGAAAGAGGTATTCAGCGGCTTCTGATTTATGAATATATGCCTAACAGAAGCGTGGAACACCATTTATCCCTGCGAACAGAGACTCATCTCTCATGGAGTATGAGATTAAAAATAGCCCAAGATGCAGCTCGTGGCTTAACATACCTGCATGAAGAAATGGATTTTCAGATAATTTTCAGAGATTTCAAATCTTCAAATATCCTTCTGGACGAGCACTGGAATGCCAAGTTGTCGGACTTCGGATTAGCAAGATTGGGACCATCTGAAGGGTTAAGTCATGTCTCAACAGAGGTTGTAGGAACAATGGGGTATGCAGCTCCTGATTATTTTCAGACCGGGCATCTCACATCAAAGAGTGATGTATGGAGCTACGGTGTTTTCCTTTATGAACTAATTACTGGCAGGCGTCCTATAGATCGAAATCGCCCCAAGGGTGAGCAAAAGCTGTTGGAATGGGTAAGGCCTTACCTTTCAGATGGTAAGAAATTTCAGTTAATATTGGATCCGAGACTTGAGAGGAAACACATCTCCAAGTCAGCGCAGAGACTTGCTATAATAGCTAACCGATGCTTGGTTAAAAGCCCGAAGAGTCGCCCAAAGATGAGTGAGGTGTTAGAAATGGTGAATCGGATTGTGGAATCTTCTGTGAGTGCTAGTCCACAGCCTCCTTTGAAGAGTGTTACATCAGTTGAAACTTCCCAGGAGAGAGAAATACAGAACAAGAAAAGGGTCATCGATCCCAAAACAGTTTATTGTAATTGGTTTAGGACATGGAGACCAAAGCTTTTAAGAACAACTTGA 1200 0.4283 MKCFAFYYGQKKDDPKILQSLSGLSELNSQNVSDTGSDSLRRNAFPSLSQRPSNLKVFTLSELKSATKNFSRSVMLGEGGFGCVYKGLINCVDDPSRKIEVAGHKEWVTEVNVLGIVEHPNLVKLVGYCADDDERGIQRLLIYEYMPNRSVEHHLSLRTETHLSWSMRLKIAQDAARGLTYLHEEMDFQIIFRDFKSSNILLDEHWNAKLSDFGLARLGPSEGLSHVSTEVVGTMGYAAPDYFQTGHLTSKSDVWSYGVFLYELITGRRPIDRNRPKGEQKLLEWVRPYLSDGKKFQLILDPRLERKHISKSAQRLAIIANRCLVKSPKSRPKMSEVLEMVNRIVESSVSASPQPPLKSVTSVETSQEREIQNKKRVIDPKTVYCNWFRTWRPKLLRTT 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1486 399 Gene3D Transferase(Phosphotransferase) domain 1 146 360 - -
Lal13g1486 399 PANTHER OS01G0588500 PROTEIN-RELATED 25 390 - -
Lal13g1486 399 PANTHER KINASE 1B 25 390 - -
Lal13g1486 399 Pfam Protein kinase domain 72 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g1486 399 ProSiteProfiles Protein kinase domain profile. 70 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g1486 399 CDD STKc_IRAK 76 344 - -
Lal13g1486 399 SUPERFAMILY Protein kinase-like (PK-like) 47 341 IPR011009 -
Lal13g1486 399 Gene3D Phosphorylase Kinase; domain 1 48 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1486 Lal-Chr13 14363451 14369394 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g1486 56 370 Glycoside Hydrolase AT3G07070 45.509 4.07e-85 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lal13g1486 Pkinase 1.9e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1486 - - gmx:100305438 650.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0102 20 656688 659572 Lal13g1486 13 14363451 14369394 PCT