Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1485 ATGGTTTTATATGAGAATTCAGATTTTATTCACTGGGGTATGAATCTTTTTGACAGTGATCCTGGTTATAATCCTGGATACTATGGTGACGTGATTCGACATAATACTAGTGATGTCTATGATGGACACTACATTCATAACCATTATGATACGGAGTATAATGAAGTAGAGAATGACGAGATCATTGCAAGGACTCTTCAAGAAGAGTTTTCACAGCTAGATATTGCTGAGCATTCAAGGTATTCACAGGTGCATGAAGAGCAGTTCCATGCTGAGCCTGCATATGATTGGCATAACGTGTCAACAATGAACTATTGTCCGCAAGGTCATGATTATACCCAAGAAGGGCTTGATGATGCAGATTCTAGTTCATGTTGTAGTCCTTGTGAAGCGGAAGAGTACTCACTGGAACTAACTGATAATTATCCCCTTGATGATGAAATAGGGAGGAGATTGAGTCATATTATTCCAATTCCTCATGTTCCAAAAATTAATGGAGAAATTCCTTCAATTGATGAAGCAACCTCAGATCATCAAAGGCTATTGGATAGATTGCAGTTATATGACTTTGTGGAGCATATGGTACAAGGTGATGGTAATTGTCAGTTCCGTGCATTATCTGATCAGTTGTATAACACACCTGATCACCACAAGTTTGTGAGACGACAAGTCGTAAACCAGTTAAAGTCTCATCCAGAGATTTATGAGGGATATGTTCCCATGGAATACAGTGACTATTTGGAGAAAATGTCCAAGAGTGGTGAATGGGGTGATCATGTCACTCTTCAAGCAGCTGCAGATTCGTATGATGTGAGAATATTTGTGATGACTTCCTTCAAGGACACATGTTGCATAGAGATTCTTCCTCATTGTGAGAAGCCAAAAGGAGTGATTTTCCTGAGTTTTTGGGCAGAGGTGCATTACAACTCAATCTACCCTCAAGGAGGTACATTACAAAAGTTTCATCCTCAGCTTGAGTCACTTTTAAACAATTGCTGGTTTTAA 1005 0.391 MVLYENSDFIHWGMNLFDSDPGYNPGYYGDVIRHNTSDVYDGHYIHNHYDTEYNEVENDEIIARTLQEEFSQLDIAEHSRYSQVHEEQFHAEPAYDWHNVSTMNYCPQGHDYTQEGLDDADSSSCCSPCEAEEYSLELTDNYPLDDEIGRRLSHIIPIPHVPKINGEIPSIDEATSDHQRLLDRLQLYDFVEHMVQGDGNCQFRALSDQLYNTPDHHKFVRRQVVNQLKSHPEIYEGYVPMEYSDYLEKMSKSGEWGDHVTLQAAADSYDVRIFVMTSFKDTCCIEILPHCEKPKGVIFLSFWAEVHYNSIYPQGGTLQKFHPQLESLLNNCWF 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1485 334 Gene3D - 171 318 - -
Lal13g1485 334 PANTHER OTU DOMAIN CONTAINING PROTEIN 31 317 - -
Lal13g1485 334 SUPERFAMILY Cysteine proteinases 176 314 IPR038765 -
Lal13g1485 334 Pfam OTU-like cysteine protease 196 282 IPR003323 -
Lal13g1485 334 ProSiteProfiles OTU domain profile. 190 314 IPR003323 -
Lal13g1485 334 PANTHER CYSTEINE PROTEINASE SUPERFAMILY PROTEIN 31 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1485 Lal-Chr13 14352356 14357508 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1485 - - gmx:100811851 547.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g1485 13 14352356 14357508 Lal13g1008 13 7393013 7398250 ECH
Lal13g1485 13 14352356 14357508 Lal13g1485 13 14352356 14357508 ECH
Lal13g1485 13 14352356 14357508 Lal24g0773 24 6002288 6007244 LSH
Lal20g0103 20 661122 667641 Lal13g1485 13 14352356 14357508 PCT