Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1484 ATGTCATCTTCAGAAGTTGCTCTCCACCACACATTCTCTCAATCAAAGACCAAACTATCAACAACTAACACCACCACCGTCTCCGACGACAATGCCAACATCGCCATCGCGAGAAGACTTCCCGCCACCCCCTCCCGTTCAACCAAGGACCGCCACACCAAGGTAAACGGCCGAGGCCGCCGCGTACGAATGCCGCCTCTCTGCGCCGCCCGGATATTCCAGCTTACCCGCGAACTCGGCCACCGCTCCGACGGTGAAACCATCGAGTGGCTCCTCCGCCATGCTGAGCCCTCCATCATCGCCGCCACTGGCACCGGCACAGTCCCCGCAGAGGCGGTATCCACTGCCTCTGCCACCGTTGCCTCTTCCACTCCCTCCCTTCCCTACCATATTCAGCCGGTGTCCTCTGGTTCCAGCGGTAACCATGGGATGTTCGCCACGGTGGAAGCGGCTGCAAATGGGTACCGGAACATGCCGTTCACAGCGCTGTTGTTGCAGCCAGCGACGGCAGAGGATACTGAACAAGAAGAGAGTTTCAGAGAACAATGA 549 0.5883 MSSSEVALHHTFSQSKTKLSTTNTTTVSDDNANIAIARRLPATPSRSTKDRHTKVNGRGRRVRMPPLCAARIFQLTRELGHRSDGETIEWLLRHAEPSIIAATGTGTVPAEAVSTASATVASSTPSLPYHIQPVSSGSSGNHGMFATVEAAANGYRNMPFTALLLQPATAEDTEQEESFREQ 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1484 182 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 22 136 IPR005333 GO:0003700
Lal13g1484 182 Pfam TCP family transcription factor 47 127 IPR017887 -
Lal13g1484 182 ProSiteProfiles TCP domain profile. 48 102 IPR017887 -
Lal13g1484 182 MobiDBLite consensus disorder prediction 1 26 - -
Lal13g1484 182 PANTHER TRANSCRIPTION FACTOR TCP16-RELATED 22 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1484 Lal-Chr13 14347709 14348257 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g1484 36 114 TCP Transcription Factor Family AT3G47620 73.418 1.22e-36 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lal13g1484 TCP 6.4e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1484 - - cam:101510590 204.142