Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1482 ATGGCTCATGCTTCTTCTTCAGCTTCTAGCAAGACATACAAACCAAGAGATGATGAACTCATTCAAGATTTCCTTTACAAAAAGATCCATGAAGAATCTGTGCCTAACTATCTCACTGTTCTTGAATATGACTTGTATGGTGAAAAGAATCCTTGGGAAATTTGGGAAGCTTTTGAAGGGTTCAGTTATGAAGGAAAAGACCTTTATATTTTCACAACCTTAAAGAAGAAATCTCTGAATGGCTCTCGTTTTGTTCGCATCATTGGTTGTGGTTCTTGGGAAGGTGAAGACACAGGAAAAAAGGTAATAGCTGAAGGGACAAATCAATGTATTGGATTGAAGAAACGTTTTAGATTTGAGAAGAGTGGTACTGAGCATGATGGTGCATGGATTATGCATGAATATAGCATTGACCCATCTTTTCAAAACAATAATTCATATGCTAATAATCAAGTTCTATGCAGATTTAGAAAGAATGAGAGGCATAATAATCAACCAAAACAGGATTCCAAAAGAACAATGGAGAAGTTGAAAAACATCACTAGAGAAGATGAGAACATATCTGCTAATAATCAAGTTCTATGCAGATTTAAAAAGAAAGAGAGACATAATAATCAACCAAAACAAGGTTCCAAAAGAACAATGGAGAAGATGAAAAACATCACTAGAGAAGAATATGAGACCTTTGAGACAAATGGCGTATCTGTAAGTTGCCTCTCTTTTAATTCATTAACATATACATATCACCTGTCCCAAAATGTTTTCCTCATCATGTCCCGACTAATTAGAAAAAGAGAAAGAAATGCAAGGGAAAAAAAAGAAATGCAAAGTGATACAAATAATTCAATTGAAAAAGAAGAAGATTATTGGAGGAAAATATTTCCGTTGGAGTTGAAGGAAGGTCAAGAAGATTTGATCCAACACGCCGAGGAAGATATACTCATTCCCAATCAAGTTAATTATGATCGTTTAAGGGAGATGATGATATTTGACAATAGTTCCTCTTTTCCACTTTAA 1017 0.3441 MAHASSSASSKTYKPRDDELIQDFLYKKIHEESVPNYLTVLEYDLYGEKNPWEIWEAFEGFSYEGKDLYIFTTLKKKSLNGSRFVRIIGCGSWEGEDTGKKVIAEGTNQCIGLKKRFRFEKSGTEHDGAWIMHEYSIDPSFQNNNSYANNQVLCRFRKNERHNNQPKQDSKRTMEKLKNITREDENISANNQVLCRFKKKERHNNQPKQGSKRTMEKMKNITREEYETFETNGVSVSCLSFNSLTYTYHLSQNVFLIMSRLIRKRERNAREKKEMQSDTNNSIEKEEDYWRKIFPLELKEGQEDLIQHAEEDILIPNQVNYDRLREMMIFDNSSSFPL 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1482 338 Gene3D NAC domain 16 165 IPR036093 GO:0003677|GO:0006355
Lal13g1482 338 SUPERFAMILY NAC domain 13 158 IPR036093 GO:0003677|GO:0006355
Lal13g1482 338 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 13 178 - -
Lal13g1482 338 ProSiteProfiles NAC domain profile. 7 159 IPR003441 GO:0003677|GO:0006355
Lal13g1482 338 Pfam No apical meristem (NAM) protein 13 137 IPR003441 GO:0003677|GO:0006355
Lal13g1482 338 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 13 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1482 Lal-Chr13 14332253 14336152 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g1482 13 165 NAC Transcription Factor Family AT5G13180 31.613 2.91e-17 78.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lal13g1482 NAM 4.4e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1482 - - aprc:113871407 241.506