Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1478 ATGGAACTTTTTCCTCAACTAGCACTCATTTTCTCTCTCACTTTGTTCTTTAGCTTCTCCTTTTGGGTTGGTAGAGCCATTGATTGTAGTGGGAATAAAATCACTAAAACCATTATTGTTGATCAATCTGGAAAAGGAGATTTCACATTGATTCAAGATGCCATTGATTCCATAAAAGAAAATAATGATCAATGGGTTAAAGTTTACATAAAGGCTGGTACATACAGAGAAAAGGTTCAAATTTCCATGTATAAACCGTGCGTCTTTTTAGAAGGTGATGGAAAAGATGTCACAACCATTACATATGGTGATTATGTTGATCAAAACTGGAATAGTGCAACATTTGTTTCTTCTCCACCCAATGTCATTGTGCTTGGTATTACCTTCGAGAACACGTTTAGGAATAGTGAAGGATCACACTTCACAGAAGCACCAGCAGCAGCAATATTTGGAGACAAAACAGCATTGTACAAGAGTGGTTTCATTGGTTTTCAAGACACATTGCTTGATTCAAATGGACGACATTACTTCAAAGATTGTTACATTCAAGGAGAAGTGGACTTCATTTTTGGCACTGGTCAATCCTATTATCAGGATTGTATGATCAATGCCACACAGGGAAAGTCTCCTACAGGTTTTATAACAGCCCAAGGAAGGGGTTCAAATAATGAAACAAATGGTTTTGTATTTAGAAGAGGTTTTATTACTGGGGATGGTCAAGTTTATCTTGGAAGAGCCTATGGACCTTATTCCAGAGTTATATTTCATGGAACTTATTTTTCTAAAGTAGTATTCCCTCAAGGTTGGGATCCCTGGCATTTCCGTGGTTATGAGTCTCAGTTAACTTATGCTGAGGTTGATTGTATTGGACCAGGGTCGAATACTAAAAATCGTGTCAAGTGGGTAAAGACTCTCACTTCTAAGGATTTAAGTAAATTTTCTTTATCACGTTTCATAAATCAGGATCGGTGGCTTTCAAAATTACCGATTACAATTTTGTGA 1002 0.3683 MELFPQLALIFSLTLFFSFSFWVGRAIDCSGNKITKTIIVDQSGKGDFTLIQDAIDSIKENNDQWVKVYIKAGTYREKVQISMYKPCVFLEGDGKDVTTITYGDYVDQNWNSATFVSSPPNVIVLGITFENTFRNSEGSHFTEAPAAAIFGDKTALYKSGFIGFQDTLLDSNGRHYFKDCYIQGEVDFIFGTGQSYYQDCMINATQGKSPTGFITAQGRGSNNETNGFVFRRGFITGDGQVYLGRAYGPYSRVIFHGTYFSKVVFPQGWDPWHFRGYESQLTYAEVDCIGPGSNTKNRVKWVKTLTSKDLSKFSLSRFINQDRWLSKLPITIL 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1478 333 Gene3D - 31 332 IPR012334 -
Lal13g1478 333 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 8 331 - -
Lal13g1478 333 SUPERFAMILY Pectin lyase-like 35 328 IPR011050 -
Lal13g1478 333 Pfam Pectinesterase 38 321 IPR000070 GO:0030599|GO:0042545
Lal13g1478 333 ProSitePatterns Pectinesterase signature 1. 62 81 IPR018040 -
Lal13g1478 333 PANTHER PECTINESTERASE 8 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1478 Lal-Chr13 14314571 14317806 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g1478 10 278 Carbohydrate Esterase AT2G19150 42.701 3.58e-65 206