Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1471 ATGGGAGGTAAATGTCCACACAGACACGTGAAGAAGAGAAGATATTCCCACAAATCTGCTCGTCGCACCAAATTTGAAATCAAAGGGGATGACATGGTTTATGATAATCTAAAGAAGCCTGATGAAGAGAGAAAACCTTTACCTGTAGATGAAGATTTACCTGGAATGGGGCAATATTATTGCCTTCACTGCGATCGTTACTTTGCCAATGTAACTGTGAGGGATGAGCATTTCAAGACTAAGCGACACAAAAAGCGGAAGCTAAAAGGACTTGCAATAAGAAGAAATAGAAGAAAGAAGAAAGGTAAAGAGCGGCAGCGAAAAACATGTGGCCTTGGAGGATCAACATCAAAACTAGTAGTGGGTCGTGGCCTGTGTTTTCGCCATTATTTGGCCTGCGACAGGCTCGACGACCATATGTGCCACTATCCACTTATCAAAGTAATGTTGGGGCCTGCACCACATACACAACTTGATGCTGATTTAGCTGCAGGGATGGGTATGCCAGATAATGGACCAAAGCTAATGTCTATGTAA 537 0.4302 MGGKCPHRHVKKRRYSHKSARRTKFEIKGDDMVYDNLKKPDEERKPLPVDEDLPGMGQYYCLHCDRYFANVTVRDEHFKTKRHKKRKLKGLAIRRNRRKKKGKERQRKTCGLGGSTSKLVVGRGLCFRHYLACDRLDDHMCHYPLIKVMLGPAPHTQLDADLAAGMGMPDNGPKLMSM 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1471 178 PANTHER EXPRESSED PROTEIN 1 178 - -
Lal13g1471 178 MobiDBLite consensus disorder prediction 1 20 - -
Lal13g1471 178 SUPERFAMILY beta-beta-alpha zinc fingers 46 87 IPR036236 -
Lal13g1471 178 Pfam Zinc-finger double-stranded RNA-binding 58 84 IPR022755 -
Lal13g1471 178 SMART ZnF_U1_5 56 90 IPR003604 GO:0003676|GO:0008270
Lal13g1471 178 ProSitePatterns Zinc finger C2H2 type domain signature. 61 83 IPR013087 -
Lal13g1471 178 Gene3D Classic Zinc Finger 46 113 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g1471 3 177 C2H2 Transcription Factor Family AT2G36930 50.251 8.75e-55 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1471 K14821 - ath:AT2G36930 175.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g1471 13 14247346 14250151 Lal13g1471 13 14247346 14250151 ECH
Lal13g1471 13 14247346 14250151 Lal5g0264 5 2314851 2318349 PCT