Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1445 ATGAACTTGAGAAATATGAAGACCTTCATCCACCAAGTTGTTACTGGTCGCTGGTTCATGATCTTTGCCTCTTGTCTAATCATGTCTGTTTCAGGTGCTACCTACATGTTTGGTTTGTTCTCTAACCAAGTAAAAACCTCTTTGGGTTATGACCAATCAACACTAAACTTGATAAGCTTCTTCAAAGACCTTGGTGCCAATCTTGGCATATTCTCGGGCTTAATCAATGAGATAACTCCACCTTGGGTCATACTCTCTATTGGTGCCTCTATGAACTTCTTAGGCTACTTCATGATATGGCTTTCTGTCACTGGCCACATTGCTAAACCCAAAGTTTGGCAAATGTGTCTCTACTTTTATATTGGTGCCAATTCACAGTCTTTTGCAAACACTGGTGCTTTAGTCACTTGTGTCAAGAGTTTTCCAAGAAGCCGTGGAAGTGTTATAGGGCTTCTTAAGGGTTATGTTGGTCTAAGTGGTGCTATTTTCACACAACTTTACCATGCTTTCTATGGTGACAATTCTAAATCTCTTATCTTACTCATTGCTTGGCTTCCTGCTGCTATTTCCATCTTTTTTCTTCCAACTGTTAGAGTATTGAGTATTGTTTCACAACCCAAAGAGATCAAAGTTTTCTATAAACTTCTCTATGTTTCACTTGCAATTGCTGGGTTTCTCATGGTGTTAATAATCATACAGAACAAATTGAGTTTCACAAGGATTCAGTACATTGTAGATGGCATAGTGGTTCTAATCTTACTTCTTCTACCACTTGTTGTTGTATTAAGAGAGGAACTCATTCTCATGAAGGCTCAAAATCAAACCTTAAATGATTCACAAACCAAAATTGTCACACAAGTTCCATTGGATCAGTCAGAAGCACAAGCTACAACAAACCCTGAAAAGGAAATTTCTTGTTTGAGAAACATTTTCAAACCACCAAATAGGGGTGAAGACTACACCATTTTCCAAGCTTTGTTCAGCATAGACATGTGGATTTTGTTCATAGCAACAGTATTTGGTGTTGGTGGAACTTTAACTGCACTTGACAATTTGGGTCAAATTGGTAACTCATTAGGATACTCAACTAAGAACCTTACAACATTTGTGTCCCTAGTTAGCATATGGAACTATCTCGGTCGTGCAATGGCTGGTTTTGCTTCTGAAATATTATTAGCCAAATACAAATTTCCTCGTACTTTAATGCTAACTCTTGTTCTGCTTCTTTCTTGTGTTGGCCATCTTCTAATTGCATTTGGTATACCAAATTCTCTTTACTTTGCATCAGTGATCATTGGGTTTAGCTTTGGTGCTATATGGCCTTTAATGTTTGCCATCATATCTGAAATATTTGGCCTCAAATATTACTCTACATTGTATAATTTTGGAGCCGTGGCGAGTCCTGTTGGATCTTACATACTCAATGTGAAAGTGAGTGGTTCTTTGTATGATAATGAAGCTTTGAAACAATTGAAGATGAAGGGTCTTAAAAGAAAAGCAGGGGAGGATTTAACTTGCTTAGGTGTTCATTGTTATAGGATGGCTTTTTTTATAATCACTGCTTCAACATTATTTGCTTGTTTTGTTTCGTTTATTTTAGTGTTAAGGACTAGAAAGTTTTACAAAAGTGATATTTATAAAAAGTTTAGATCAGAAAAGATAGATGAAGCAGCAAAAACTGAAACAGAGCATTGA 1695 0.367 MNLRNMKTFIHQVVTGRWFMIFASCLIMSVSGATYMFGLFSNQVKTSLGYDQSTLNLISFFKDLGANLGIFSGLINEITPPWVILSIGASMNFLGYFMIWLSVTGHIAKPKVWQMCLYFYIGANSQSFANTGALVTCVKSFPRSRGSVIGLLKGYVGLSGAIFTQLYHAFYGDNSKSLILLIAWLPAAISIFFLPTVRVLSIVSQPKEIKVFYKLLYVSLAIAGFLMVLIIIQNKLSFTRIQYIVDGIVVLILLLLPLVVVLREELILMKAQNQTLNDSQTKIVTQVPLDQSEAQATTNPEKEISCLRNIFKPPNRGEDYTIFQALFSIDMWILFIATVFGVGGTLTALDNLGQIGNSLGYSTKNLTTFVSLVSIWNYLGRAMAGFASEILLAKYKFPRTLMLTLVLLLSCVGHLLIAFGIPNSLYFASVIIGFSFGAIWPLMFAIISEIFGLKYYSTLYNFGAVASPVGSYILNVKVSGSLYDNEALKQLKMKGLKRKAGEDLTCLGVHCYRMAFFIITASTLFACFVSFILVLRTRKFYKSDIYKKFRSEKIDEAAKTETEH 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1445 564 Gene3D MFS general substrate transporter like domains 304 542 IPR036259 -
Lal13g1445 564 PANTHER MFS TRANSPORTER 3 559 - -
Lal13g1445 564 SUPERFAMILY MFS general substrate transporter 17 540 IPR036259 -
Lal13g1445 564 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 3 559 - -
Lal13g1445 564 CDD MFS_Mch1p_like 16 527 - -
Lal13g1445 564 Pfam Nodulin-like 17 261 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1445 Lal-Chr13 13945815 13947509 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g1445 5 552 Nodulin-like Gene Family AT2G39210 63.685 0.0 722
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1445 - - gmx:100814000 838.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g1445 13 13945815 13947509 Lal12g0471 12 3370397 3375025 ECH
Lal13g1445 13 13945815 13947509 Lal13g1445 13 13945815 13947509 ECH
Lal20g0114 20 753237 755072 Lal13g1445 13 13945815 13947509 PCT
Lal13g1445 13 13945815 13947509 Lal20g0114 20 753237 755072 PCT