Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1434 ATGGCGGTTCCAGGGAGGCGCAATGGTTTAAACGAGGAAGAAGAAGATGACAACGCCCTTTTCGAAGTTGAAGGCATCGTCGACTTCGTTGATTCTGATACGCCTCCTCATCTCCATGACCTCTCCGCCGCCGCTCAGCACGGCGATGTCGTCTCCCTCCGCCGTGCTTTAGATAACTTGACTGGTAGTATTGATGAGCCAGTGGAGGATGGGGATACAGCTCTTCATTTGACCTGTTTATATGGTCACCTGGAATGTGTCCAGCTACTTCTAGAAAGAGGAGCAAACTTGGAGGCAAAGGATGACGATGGTGCAATACCTTTACATGATGCTTGTGCAGGAGGATTTACACAGATAGTCCAACTGTTATTTAACAAAGCTAATGATACAGAGCATATAAAAAGGATGCTCGAATCAGTTGATTCTGAGGGTGATACACCTCTCCATCATGCAGCAAGAGGTGAGCATGTTGATGTAATTAGGTTGTTGCTATCTAATGGTGCATCTCCCACAAAGACCAACTTATATGGAAAGACCCCGGCAGAGCTACCCGATCTGGGCACAGATGCTAGGAGGTTGCTGGAAGCTCTTGATACTGCAATGGCATGA 609 0.4745 MAVPGRRNGLNEEEEDDNALFEVEGIVDFVDSDTPPHLHDLSAAAQHGDVVSLRRALDNLTGSIDEPVEDGDTALHLTCLYGHLECVQLLLERGANLEAKDDDGAIPLHDACAGGFTQIVQLLFNKANDTEHIKRMLESVDSEGDTPLHHAARGEHVDVIRLLLSNGASPTKTNLYGKTPAELPDLGTDARRLLEALDTAMA 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1434 202 SUPERFAMILY Ankyrin repeat 33 183 IPR036770 -
Lal13g1434 202 ProSiteProfiles Ankyrin repeat region circular profile. 70 102 - -
Lal13g1434 202 ProSiteProfiles Ankyrin repeat profile. 143 175 IPR002110 GO:0005515
Lal13g1434 202 ProSiteProfiles Ankyrin repeat profile. 70 102 IPR002110 GO:0005515
Lal13g1434 202 PANTHER TANKYRASE-LIKE 1 196 - -
Lal13g1434 202 Gene3D - 110 186 IPR036770 -
Lal13g1434 202 Pfam Ankyrin repeats (3 copies) 103 174 IPR002110 GO:0005515
Lal13g1434 202 Pfam Ankyrin repeat 70 102 IPR002110 GO:0005515
Lal13g1434 202 ProSiteProfiles Ankyrin repeat region circular profile. 143 169 - -
Lal13g1434 202 ProSiteProfiles Ankyrin repeat profile. 103 135 IPR002110 GO:0005515
Lal13g1434 202 PANTHER SOWAH (DROSOPHILA) HOMOLOG 1 196 - -
Lal13g1434 202 Gene3D - 34 109 IPR036770 -
Lal13g1434 202 PRINTS Ankyrin repeat signature 71 86 IPR002110 GO:0005515
Lal13g1434 202 PRINTS Ankyrin repeat signature 159 173 IPR002110 GO:0005515
Lal13g1434 202 SMART ANK_2a 143 172 IPR002110 GO:0005515
Lal13g1434 202 SMART ANK_2a 70 99 IPR002110 GO:0005515
Lal13g1434 202 SMART ANK_2a 103 132 IPR002110 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g1434 41 185 Ion Channels AT2G25600 30.769 1.14e-12 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1434 - - gmx:100527544 329.717