Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1419 ATGGGGGACAATCAAGAAGTAGAGAGCAGCGATTTCACTTCCGATGACGAAGGCACAAAGGATTATCGACGCGGTGGTTATCACGCTGTTCGAATTGGCGACAGTTTCAAGAATGGTCGCTATGTCATTCAGAGCAAGCTTGGTTGGGGTCATTTCTCCACTGTTTGGCTCGCTTGGGATACCCAATACTCTAAATATGTGGCTTTGAAAGTTCAGAAGAGTGCTCAGCATTACACAGAGGCAGCCCTGGATGAGATAACGATTTTGCAACAGATTGCAGAGGGAGACCAGGATGATAAGAAATGTGTGGTGAAGCTTTTGGATCATTTCAAGCATTCTGGTCCAAATGGGCAGCATGTTTGCATGGTGTTTGAGTACCTTGGGGAAAATCTTTTAACTCTTGTCAAGTATTCTGATTATCGTGGAATACCTATCAACATGGTTAAAGAGATATGCTTTCATATTCTGGTTGGATTGGATTACTTACATAAGCAACTTTCTATCATACATACTGACCTGAAACCTGAAAACATCCTCCTTTTATCAACCATAGATCCATCTAAGGATCCTAGAAAGTCTGGTGCTCCTCTTATTCTTCCTAATACTAAAGATAAGACGGTACTGGAGTCAGGAGCTGCAAAAGACACAAAGACATCGAATGGGGATTTTATTAAGAATCATAAGAAAAAGATTAAAAGAAAAGCTAAGCAAGCAGCTTATGGATGTGTGGAGAAGGAAGCTTCTGAAGGAGTTAATGGTAATCCTGAAACCTCTGGTGCTCTGGAATCTTTACCAAATGCAAGTTCTTCAGGCACTTGTGACTTGTTGGATGCTGATGGAACAAACTCAAAAGAGCAGGGTAACAAAAGAGGAAGCCGTACAACGAGACAGAAGTTGTTGGCATCAGCTGACCTCAAGTGCAAGCTAGTTGACTTTGGTAATGCTTGCTGGACATATAAACAGTTCACAAATGATATCCAGACAAGACAATATCGGTGTCCAGAGGTTATCCTTGGATCAAAATATTCTACTTCTGCAGATCTTTGGTCTTTCGCTTGCATTTGCTTTGAGCTGGCTACTGGAGATGTGCTATTTGATCCTCACACTGGCGACAACTTCGATAGGGATGAGGACCACTTAGCATTAATGATGGAACTTCTTGGAATGATGCCAAGGAAGATTGCACTAGGGGGGCGTTATTCCCGTGATTTCTTTAATAGATATGGTGATTTGAGGCATATCCGGCGATTGCGATTCTGGTCATTGAACAAAGTCCTCGTGGAGAAATATGATTTCAGTGAGCAAGATGCAAATGACCTGACTGACTTTCTGGTTCCAATCCTTGACTTTGTTCCTGAGAAACGGCCCACTGCTGGTCAATGCCTTCTCCATCCATGGATGAGTGCAGGTCCACGCCTTCTGGAGCCATCTTTGTCTTCTAATCACAACGGACATGCAGATGCTACCATTTCTGACCAAAAGAGAAAAGACAAAGATGAGAGAGAGGCCATGGAGGAAGGAATGGGAAATATTGCTATCAATTCAGATGCTAAACCACTCTTACCTTCTCCATCTAAGAAAGCCTTCCAAGGCAGCCACAAACAGTTCATTTAG 1614 0.4275 MGDNQEVESSDFTSDDEGTKDYRRGGYHAVRIGDSFKNGRYVIQSKLGWGHFSTVWLAWDTQYSKYVALKVQKSAQHYTEAALDEITILQQIAEGDQDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLVKYSDYRGIPINMVKEICFHILVGLDYLHKQLSIIHTDLKPENILLLSTIDPSKDPRKSGAPLILPNTKDKTVLESGAAKDTKTSNGDFIKNHKKKIKRKAKQAAYGCVEKEASEGVNGNPETSGALESLPNASSSGTCDLLDADGTNSKEQGNKRGSRTTRQKLLASADLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVILGSKYSTSADLWSFACICFELATGDVLFDPHTGDNFDRDEDHLALMMELLGMMPRKIALGGRYSRDFFNRYGDLRHIRRLRFWSLNKVLVEKYDFSEQDANDLTDFLVPILDFVPEKRPTAGQCLLHPWMSAGPRLLEPSLSSNHNGHADATISDQKRKDKDEREAMEEGMGNIAINSDAKPLLPSPSKKAFQGSHKQFI 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1419 537 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 529 - -
Lal13g1419 537 MobiDBLite consensus disorder prediction 488 506 - -
Lal13g1419 537 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672|GO:0006468
Lal13g1419 537 CDD STKc_SRPK 30 467 - -
Lal13g1419 537 MobiDBLite consensus disorder prediction 1 20 - -
Lal13g1419 537 MobiDBLite consensus disorder prediction 251 282 - -
Lal13g1419 537 MobiDBLite consensus disorder prediction 474 537 - -
Lal13g1419 537 ProSitePatterns Protein kinases ATP-binding region signature. 47 70 IPR017441 GO:0005524
Lal13g1419 537 SUPERFAMILY Protein kinase-like (PK-like) 37 475 IPR011009 -
Lal13g1419 537 Gene3D Transferase(Phosphotransferase) domain 1 124 468 - -
Lal13g1419 537 ProSiteProfiles Protein kinase domain profile. 41 467 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g1419 537 MobiDBLite consensus disorder prediction 245 295 - -
Lal13g1419 537 PANTHER SERINE KINASE-LIKE PROTEIN 9 529 - -
Lal13g1419 537 Pfam Protein kinase domain 41 181 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g1419 537 Pfam Protein kinase domain 299 467 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g1419 537 Gene3D Phosphorylase Kinase; domain 1 17 123 - -
Lal13g1419 537 SMART serkin_6 41 467 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1419 Lal-Chr13 13649095 13655548 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g1419 8 514 EF-hand Containing Proteins AT5G22840 69.472 0.0 734
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Lal13g1419 Pkinase 7.8e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1419 K08832 - gmx:100803070 942.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g1419 13 13649095 13655548 Lal13g1419 13 13649095 13655548 ECH