Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1414 ATGATGGCTCAGAAGCACTTATTGCAAGAGCTACTGAAAGAAGATCAAGAACCATTCCTTCTAAAGAACTACATTTCAGATAGACTCAGCCAACTCAAAATTAGGCCTAATAATCCCTCAAAAACAAATCTTAATAATAGTTTACTACTGAAGAAACAACATATCCAACAAAACTCAAGGTTCCCTATAAACCTATGCAAAAATGCATGCTTTCTCTCTTTCCACAACACTACTATTTCTACACCAGATATTACAAAATCCCCTCTCTTTCAATTCACATCTCCTTCAAAAAGCCCATGCATGTCTCAAAACACTATCTTCCTCCACGTTCCTTCTAGAACTGCAACCCTTCTTGTTGAAGCTGCTTCCAAGATTCAGAAACACTCAAATACCAAACAACAAAAGAAAAGTAACAGGTTCGGGTTATGCTTTGAGTTGTTATTAAAAAAACTAACAAAAAGAGGCAGAAACAACAAAAAGAGAGAAATAAAGGGTAACAACAACAACAACAATGTTAAGGTTAAAGATCTCTTGAGATTTCATTCTTCAAATAAGATTTGTTATGTGAATGGAGCATGTTCATGTGAGGTGGGGTTCACGTGTTCTTGTAATGGGAATGCGAGTAGTGCTGTTTGGTCAGAGAGCAATGAAGATAATAAATCGTTGGACAGTGAAACTTTGAGTAATAGTAATGAATATTTTGACTTTATTGAAGATAAAGAAAACACTCAGTGTGTTTTCTTTGATGATAAGAAAAATGGTGAGTTCTTCTGTGAAAGCCCTTTCCGTTTTTCTCTCGAACGGAGTCCCACCGCCGTATCCGGCTGCCGGACACTGGAGTTTTCATCGCCGGTGTCGTCCCCGATTCACCATAGAACAGAGGACAAAGAAACTAATGAAGTAGATAAACTCAACAAATTCCAATCAAGTGAAGAAGAAGAAGAAAAGGAACAGTGTAGTCCAGTATCTGTATTAGACCCACCCTTTGAGGATGATGATGATGTTCATGAAAACTATAACCAAATGGATGGTTTTCATAATGCACAGAGAGCTAAGCAGCAATTATTGTACAAGCTTGGAAGATTTGAAAGCATAGCAGAGTTAGATCCATTAGAATTTGAGAAAAGAATGGTAGACCAAGAAGAGTATGAGTATGAAACATTTATGGAAAATGATGAATGTGAAGATGAAAATTTTGAAACATTATGTGAAGAAAAGGAATTGAGACAAATAGTATTTGAAAAGCATGTCCCTGAAGACCTTAAGAGACTAGTTTTTGATCTCATTATAGAGGAAGAGAGAGAATTTGATTCCTCAAAAGATAGGGACATGATAATAAGAAGGGTTACTAGGAGGTTGGATTTGTGGAAAGAAGTGGAGTTTAACACAATTGATATGATGATACAAGAGGACTTTTGTAGAGAGGAATGTGGGTGGAAGAAAAATACAGAGCAAATAAGAGACTTAGCTAGGGAAGTTGAATTTGCTATATTTGGCTTTCTGGTGGAGGAATTCTCAGAGGATTTACTATCTTATAAAAAAAGATGTCGGCCCAGTGCACGATATTCCCATCTAGTGGAGTGTGAACGATAG 1593 0.3672 MMAQKHLLQELLKEDQEPFLLKNYISDRLSQLKIRPNNPSKTNLNNSLLLKKQHIQQNSRFPINLCKNACFLSFHNTTISTPDITKSPLFQFTSPSKSPCMSQNTIFLHVPSRTATLLVEAASKIQKHSNTKQQKKSNRFGLCFELLLKKLTKRGRNNKKREIKGNNNNNNVKVKDLLRFHSSNKICYVNGACSCEVGFTCSCNGNASSAVWSESNEDNKSLDSETLSNSNEYFDFIEDKENTQCVFFDDKKNGEFFCESPFRFSLERSPTAVSGCRTLEFSSPVSSPIHHRTEDKETNEVDKLNKFQSSEEEEEKEQCSPVSVLDPPFEDDDDVHENYNQMDGFHNAQRAKQQLLYKLGRFESIAELDPLEFEKRMVDQEEYEYETFMENDECEDENFETLCEEKELRQIVFEKHVPEDLKRLVFDLIIEEEREFDSSKDRDMIIRRVTRRLDLWKEVEFNTIDMMIQEDFCREECGWKKNTEQIRDLAREVEFAIFGFLVEEFSEDLLSYKKRCRPSARYSHLVECER 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1414 530 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETD1B-LIKE PROTEIN 1 511 - -
Lal13g1414 530 MobiDBLite consensus disorder prediction 307 326 - -
Lal13g1414 530 PANTHER OS04G0572500 PROTEIN 1 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1414 Lal-Chr13 13549759 13553673 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g1414 1 330 TRM (TON1 Recruiting Motif) Superfamily AT5G03670 39.167 3.38e-45 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1414 - - lang:109335034 793.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1204 11 15799433 15804168 Lal13g1414 13 13549759 13553673 PCT
Lal1g1770 1 20066950 20075117 Lal13g1414 13 13549759 13553673 PCT
Lal13g1414 13 13549759 13553673 Lal11g1204 11 15799433 15804168 PCT
Lal13g1414 13 13549759 13553673 Lal1g1770 1 20066950 20075117 PCT