Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1403 ATTTTTCTGCTTAAACGAACCCTAATATGTTACATAACACTAACAAACCCTTTTTTCACTATTCAGTGTTCTAAGAAATCGCCGTTTGTTCTCTCTTCTGATCTTCAATCTCACAGAAAGATGAAGGTTATCGCTGCTTATTTGCTTGCTGTTCTTGGAGGCAACAAAACCCCATCAGAAAAAGACATCAAAAACATCCTTGCCTCTGTTGGAGCTGAAGCCGACGATGATAAGATCAAGCTTCTTTTATCTGAAGTTAAGGGTAAAGATATAGAAGATATTATTGCTTCTGGTAGGGAAAAGTTAGCCTCAGTGCCTTCCGGTGGTGGTGCCGTTTCGGTTGCTGCTGCTCCTGGTGGTGGAGGTAGTGCTGCTGCTGCACCAGCAGCTGTTGAGGCAAAGAAGGAGGAGAAGGTCGAGGAGAAAGAGGAATCTGATGATGATATGGGCTTCAGTCTCTTCGATTAA 468 0.4316 IFLLKRTLICYITLTNPFFTIQCSKKSPFVLSSDLQSHRKMKVIAAYLLAVLGGNKTPSEKDIKNILASVGAEADDDKIKLLLSEVKGKDIEDIIASGREKLASVPSGGGAVSVAAAPGGGGSAAAAPAAVEAKKEEKVEEKEESDDDMGFSLFD 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1403 155 Hamap 50S ribosomal protein L12 [rpl12]. 42 155 IPR027534 GO:0003735|GO:0005840|GO:0006414
Lal13g1403 155 Gene3D - 40 99 IPR038716 -
Lal13g1403 155 MobiDBLite consensus disorder prediction 117 155 - -
Lal13g1403 155 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 25 155 IPR044076 GO:0002182|GO:0003735|GO:0022625
Lal13g1403 155 Pfam 60s Acidic ribosomal protein 58 154 - -
Lal13g1403 155 CDD Ribosomal_P2 41 155 IPR044076 GO:0002182|GO:0003735|GO:0022625
Lal13g1403 155 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P2A-LIKE 25 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1403 Lal-Chr13 13364938 13366975 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g1403 41 110 Cytoplasmic Ribosomal Protein Gene Family AT2G27710 70.000 9.06e-29 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1403 K02943 - qsu:111996733 125.561