Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1402 ATGAAATTTATTATAAAAATACAGCCTTACATTGTTTACATGGGAGAAATGCCAATGGGTAGAACCTATGCCATAAAGGAGCACCACCTTAACTTGTTGGAAGCTGTGACTGGAAGCCAAAAGATAGCCAAAAAAATCAGAATACATAGCTATGGGAAGAGCTTCAATGGATTCGTTGCCCGTCTTTTGCCACATGAAGCAAAGAAATTACTAGGGAAGGAGAATGTGATATCTGTGTTTCCAAATACACATAATAAATTACACACAACAAGATCATGGGATTATCTGGGAATGCCCTTAAATGTGAACAGACGCCCCAATATAGAGAGCAATATCATTGTTGGTGTCTTAGACACAGGGATTTCACTTGATTGCCCAAGTTTTAATGATAAGGGTTATGGGCCTCCACCACCTAGATGGAAGGGCAAATGTGTTACTGGTGCAAATTTTACTGGCTGCAACAACAAGGTGATTGGAGCAAAATACTTCTACTTAGAACAACCTGTCATAGACAATGCCAGCCCCGTGGACGAAGACGGCCACGGTACTCACACATCCTCCACGGCAGCAGGCGTGCCAGTGGAGGGTGCTAGTGTCGATGGCATAGGCCGAGGCACTGCACGTGGCGGAGTCCCATCCGCCCGCATAGCCATGTACAAGGTCTGCTGGGAGTCAGGATGTAGTGACATGGACATGTTGGCTGCTTTTGATGAGGCCATAGCTGATGGTGTCAACTTGATATCAGTGTCTATAGGGGGGCCACCTAGGGACTTTTTCAGTGACCCTGTTGCCATTGGATCATTTCATGCTATGAGGAGAGGGATTCTTACTTCTTGTTCAGCTGGGAATGATGGTCCTGATCTTAAGAGTGTTGAAAATGTGGCTCCTTGGATTATGACTGTGGCAGCTTCTTCCATTGATAGAGAGTTCACAACAATGGTAGCCTTAGGTGATGGCATGAATGCTACTGGAATATCTATTAATACCTTTACCCCTGAGAACAAAATGTACCCATTGACTAGTGGAGCCCTTGCTGCTAATCATAGCAGAGATGAATATGGCAATGCAAGTTCTTGTGATACTGAGGCTATGAGCAAGGACATGGTGATCGGGAAGATTGTATACTGCATTGGACAGGGCAGCCAGGACTCGAACATCAAAGAATTAGGCGGAGCAGGGACCATTGTTGGCCTTGACGAGAGAGCCGATTTCGGCTCCATCACAATTATTCCAGGGTCCTATCTTGATGCCAATACTGTAGGCAAACAGATTGAGCACTACATCAATTCCACCAAGGATCCTGTAGCTATAATATACAAGTCAGTAAGTACAAGAATACCTGCTCCACGTATTATTTCTTTCTCATCCAGAGGTCCTCAGTCCATCGCCAACAACATCCTAAAGCCTGATTTGGCTGCTCCTGGAGCAGACATACTAGCTGGTTATTCTAAACTGACAAGTCTAACCGGAAGTCCTGATGATAATCGTCACTATGTTTTTAATATCTTATCCGGAACATCTATGGCCTGTCCACATGCTACAGCTGCTGCCGCCTATGTTAAATCATTCCGCCCTGGCTGGAGTCCGGCTGCAATCAAATCTGCTCTGATGACCACAGCTACTCCAATGAGTATCAAAGACAATTCAGCAGAGCTAGGATCTGGTTCAGGGCAAATAAACCCACTAAGAGCAATACATCCTGGCCTACTTTATGACATGAATATGAACTCATATATTGCATATCTATGCAAGGAAGGCTACAGCAACATCAACATTGATATACTAATTGGCAGCAAAGGTTTCAATTGCTCTACCATTGCCACTCCTCCACAAAGCACTGATGGAATCAACTACCCTTCAATGTATACCCGGATCTTATCCCCGAATTCGCCAATTTCCGCAATCTTTTATAGGAATGTGACCAATGTAGGACAGGCAAATTCAACTTATAAGGCTATAGTCACAGCACCTAAGGGTCTTTCCATTGAGGTTGTCCCAAACATATTGCAGTTTAGTAAGTTGCGCCAAGAGTTGTCATTCAAGGTTGTTGTTAATGGACCTCCAATGCCACAGGAGATAAATATATTATCAGCATCAATTGAATGGAATGACTCTAGACACAGTGTTAGAAGCCCTATTCTTGTTTATAAAGAACAAGTCTAA 2163 0.4383 MKFIIKIQPYIVYMGEMPMGRTYAIKEHHLNLLEAVTGSQKIAKKIRIHSYGKSFNGFVARLLPHEAKKLLGKENVISVFPNTHNKLHTTRSWDYLGMPLNVNRRPNIESNIIVGVLDTGISLDCPSFNDKGYGPPPPRWKGKCVTGANFTGCNNKVIGAKYFYLEQPVIDNASPVDEDGHGTHTSSTAAGVPVEGASVDGIGRGTARGGVPSARIAMYKVCWESGCSDMDMLAAFDEAIADGVNLISVSIGGPPRDFFSDPVAIGSFHAMRRGILTSCSAGNDGPDLKSVENVAPWIMTVAASSIDREFTTMVALGDGMNATGISINTFTPENKMYPLTSGALAANHSRDEYGNASSCDTEAMSKDMVIGKIVYCIGQGSQDSNIKELGGAGTIVGLDERADFGSITIIPGSYLDANTVGKQIEHYINSTKDPVAIIYKSVSTRIPAPRIISFSSRGPQSIANNILKPDLAAPGADILAGYSKLTSLTGSPDDNRHYVFNILSGTSMACPHATAAAAYVKSFRPGWSPAAIKSALMTTATPMSIKDNSAELGSGSGQINPLRAIHPGLLYDMNMNSYIAYLCKEGYSNINIDILIGSKGFNCSTIATPPQSTDGINYPSMYTRILSPNSPISAIFYRNVTNVGQANSTYKAIVTAPKGLSIEVVPNILQFSKLRQELSFKVVVNGPPMPQEINILSASIEWNDSRHSVRSPILVYKEQV 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1402 720 SUPERFAMILY Subtilisin-like 87 569 IPR036852 GO:0004252|GO:0006508
Lal13g1402 720 CDD Peptidases_S8_3 86 541 IPR034197 -
Lal13g1402 720 Gene3D - 307 444 - -
Lal13g1402 720 PANTHER CUCUMISIN PROTEIN 7 717 - -
Lal13g1402 720 Pfam Fibronectin type-III domain 616 715 IPR041469 -
Lal13g1402 720 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 7 717 IPR045051 -
Lal13g1402 720 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 114 124 IPR023827 -
Lal13g1402 720 MobiDBLite consensus disorder prediction 176 195 - -
Lal13g1402 720 Pfam Peptidase inhibitor I9 10 88 IPR010259 -
Lal13g1402 720 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 6 88 IPR037045 -
Lal13g1402 720 Gene3D Peptidase S8/S53 domain 111 578 IPR036852 GO:0004252|GO:0006508
Lal13g1402 720 ProSiteProfiles Serine proteases, subtilase domain profile. 92 565 - -
Lal13g1402 720 ProSitePatterns Serine proteases, subtilase family, serine active site. 505 515 IPR023828 -
Lal13g1402 720 CDD PA_subtilisin_like 316 438 - -
Lal13g1402 720 PRINTS Subtilisin serine protease family (S8) signature 109 128 IPR015500 -
Lal13g1402 720 PRINTS Subtilisin serine protease family (S8) signature 177 190 IPR015500 -
Lal13g1402 720 PRINTS Subtilisin serine protease family (S8) signature 504 520 IPR015500 -
Lal13g1402 720 Gene3D - 582 718 - -
Lal13g1402 720 Pfam Subtilase family 110 548 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1402 Lal-Chr13 13353900 13359350 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g1402 5 539 Subtilisin-like Serine Gene Family AT5G03620 61.060 0.0 662
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1402 - - gmx:100816428 1051.97