Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1396 ATGGCGGAAGAACATCGATGCCAAGCTCCCGAAGGACACAGACTCTGCACAAATAACTGTGGATTCATCGGAAACCCAACCACCATGAATCTCTGTTCCAAATGCTACAGAGATATTCGTTTAAAGTTACAAGAAGAAGCTTCCACCAAATCCACAATCGAAACCGCTCTCTCCTCCAGCACCTCTTCTCCGCCGTCTCCGGCCGTCGTATCCATCCCTTGTATATCAAACTCAACCGTAACAACCTTAACCAAAGACGCTATTCCTACCGGATTAAAATCTGAAGCGGTTCAACCGAACCGGTGCGGTTCGTGCAGGAAGCGGGTCGGTTTAACCGGGTTCAAGTGCAGGTGTGGGGTCACGTTCTGCGGGACCCATAGGTACCCTGAGAAACACGTGTGCAGTTTCGATTTCAAAACAGTGGGGAGAGAGGAAATAGCTCGAGCGAATCCTGTGATCAAAGCGACCAAGTTGGAGAGGATTTGA 486 0.4959 MAEEHRCQAPEGHRLCTNNCGFIGNPTTMNLCSKCYRDIRLKLQEEASTKSTIETALSSSTSSPPSPAVVSIPCISNSTVTTLTKDAIPTGLKSEAVQPNRCGSCRKRVGLTGFKCRCGVTFCGTHRYPEKHVCSFDFKTVGREEIARANPVIKATKLERI 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1396 161 ProSiteProfiles Zinc finger A20-type profile. 10 44 IPR002653 GO:0003677|GO:0008270
Lal13g1396 161 SMART AN1_Zf_4 102 139 IPR000058 GO:0008270
Lal13g1396 161 Pfam A20-like zinc finger 14 37 IPR002653 GO:0003677|GO:0008270
Lal13g1396 161 SUPERFAMILY AN1-like Zinc finger 90 155 IPR035896 -
Lal13g1396 161 SMART A20_3 13 37 IPR002653 GO:0003677|GO:0008270
Lal13g1396 161 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 161 - -
Lal13g1396 161 Gene3D - 1 66 - -
Lal13g1396 161 Pfam AN1-like Zinc finger 102 138 IPR000058 GO:0008270
Lal13g1396 161 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 15 58 - -
Lal13g1396 161 Gene3D - 75 157 IPR035896 -
Lal13g1396 161 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 6 1 161 - -
Lal13g1396 161 ProSiteProfiles Zinc finger AN1-type profile. 96 142 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1396 Lal-Chr13 13296371 13296856 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g1396 1 161 C2H2 Transcription Factor Family AT3G52800 52.353 7.11e-53 164
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g1396 13 13296371 13296856 Lal13g1396 13 13296371 13296856 ECH