Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1394 ATGGTGCGCAACATTCTGGCGGTGGATGGCGCAACAACGGGGGTGGTCGGAAGTATGGAGGTTATGGTGGAGGTCGGTCCTCGACCAGCGGTAAAGGTGATGGTCGGGGGCAGTTCTCTGGTGGCCAAGGTGGAACCACTCCTCCTCAATGGCAGCAGCAGCAACCATTTCCATGGGGCTGGTATAATTTGGCCTGGCCTGTTCCTCCTTGTCCATTCCCAAATGAAGGATGGGCTCGGCCCAATACTCCTCAATACTTCTATATCTTATAACACAGAGGATGAAGTGACTGAGAAAGATATAGTTCCTTATGTTGGCATGGAGTTTGAGACTGAAGATCATGCATATAAATTTTACAATATGTATGCTGGCTTCATTGGTTTTAGCATTAGAAAAGATTGGAAGAATACAAGCAAGTTAGATAAGGACATTGTAATAGCTCGACGATTTGTTTGTTTTAAAGAAGGCTTAAAGAGAAAGAAAGATCAAGAAGGGATAAAACCTCGAAAAGATATTAGAACTAGATGTTTAGCACAAATGACTATTGGTCGAGAATCAAATGGAAAATATGTTGATAAATCATTTGCTAATGAACATAATCATGATCTTGCAACTCCCAAAAGTAGGCATAAGTTACCATCACAAAGGAGAATTTCTACTGTTCAAGCCGCCGAAGTTGAATTGGCAAGTCGTTCTGACTACACTTATTTTGGAGATGTGGTATGTTTTGATACCACCTATCGTACCAACAAGGATCTTCGACCATTTGCTCCTTTCATTGGATTCAACCATCATCGAGAAAGCCTGTTATTTAGTGCTGCATTATTATATGATGAAACATTTGAATCATTTGAATGGTTGTTCAAGATTTTTCTTAAGGCTATGTGTGGAAAGAAAGACGTGGGAAATGTTTTTCCTGAATCATATCATCGTTTATGTCTATGGCATTTGTTTCAAAATGCATTGAAGAAAGTTAATCATGCCTTTCAAAATTCAGATTCTTTTGCTGCTGAGTTGCGAAGTTGCATTTATGACTTCGAGTATGAGGAAGACTTTATTAAATCCTGGCAATCATTACTTGAGAAGAATAACCTTCTCCAAAATAAATGGATGGGAGATCTCTTTAAGCTCAAAGAAAAATGGGCTTTAGTATATGGGAGAGATACTTTTTCAGCCGGTGCTATGACGATACAATTAAGTGAGAGTTTCAATGGTCGTTTTAGACTTTACATGAAATCCACCTTTAATGTGCTAAAAATTTTCAGGAATTTTGAAAGCGATGTTCTTCGTGTACTTAATCATCTGAATATAATTATTATTCCCCCGAAATACATCCTTAAATGGTGGACTAAGCATGCTCGAAGTGGATGTGTTTTAGACAACAAAGGGCAGATTATCAAAGAAGATCCTAAGGTGGTCGTCTTAAATCGCTATAAGGATAATTGTCGTAGTGCAGTAGAAGTATCAAGTAGGGCTGCTGAAAGTGAAGAAGCTTCAACATTTTTTAAACAGAAGATCTTAAACAAAAGATCATTAGCAACAAGTACAGGTCATAGTGATATAAATTGTCAAACTGATCAAGTTAGGAAAAATGACACAATTGAAAAAGATGATGCAACTCAAGCCAAGGGTATGAAGAAGAAAGGTGGTGCCTCTCGTGTAAAAGGTAGGCCAAAAAGTTGTGTGGAGAAGAAGAAAAGGAATAAAGACAATAACAAGTTCGGTTCAATGAGACATGACTTTATTTCCATTCCAACTCCTACTACACAGAACATGCCATTTTTGCAGGGATGTCAAGTTCCAATCATTGTAGATCCCAATTTAACTCACGCCAATAATCACTCTCAAGATTGA 1854 0.383 MVRNILAVDGATTGVVGSMEVMVEVGPRPAVKVMVGGSSLVAKVEPLLLNGSSSNHFHGAGIIWPGLFLLVHSQMKDGLGPILLNTSISYNTEDEVTEKDIVPYVGMEFETEDHAYKFYNMYAGFIGFSIRKDWKNTSKLDKDIVIARRFVCFKEGLKRKKDQEGIKPRKDIRTRCLAQMTIGRESNGKYVDKSFANEHNHDLATPKSRHKLPSQRRISTVQAAEVELASRSDYTYFGDVVCFDTTYRTNKDLRPFAPFIGFNHHRESLLFSAALLYDETFESFEWLFKIFLKAMCGKKDVGNVFPESYHRLCLWHLFQNALKKVNHAFQNSDSFAAELRSCIYDFEYEEDFIKSWQSLLEKNNLLQNKWMGDLFKLKEKWALVYGRDTFSAGAMTIQLSESFNGRFRLYMKSTFNVLKIFRNFESDVLRVLNHLNIIIIPPKYILKWWTKHARSGCVLDNKGQIIKEDPKVVVLNRYKDNCRSAVEVSSRAAESEEASTFFKQKILNKRSLATSTGHSDINCQTDQVRKNDTIEKDDATQAKGMKKKGGASRVKGRPKSCVEKKKRNKDNNKFGSMRHDFISIPTPTTQNMPFLQGCQVPIIVDPNLTHANNHSQD 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1394 617 PANTHER PROTEIN FAR1-RELATED SEQUENCE 12-LIKE 234 427 - -
Lal13g1394 617 PANTHER PROTEIN FAR1-RELATED SEQUENCE 12-LIKE 429 506 - -
Lal13g1394 617 PANTHER PROTEIN FAR1-RELATED SEQUENCE 12-LIKE 90 221 - -
Lal13g1394 617 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 90 221 IPR031052 GO:0006355
Lal13g1394 617 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 429 506 IPR031052 GO:0006355
Lal13g1394 617 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 234 427 IPR031052 GO:0006355
Lal13g1394 617 MobiDBLite consensus disorder prediction 548 562 - -
Lal13g1394 617 Pfam MULE transposase domain 240 293 IPR018289 -
Lal13g1394 617 MobiDBLite consensus disorder prediction 540 579 - -
Lal13g1394 617 Pfam FAR1 DNA-binding domain 117 204 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1394 Lal-Chr13 13290055 13293006 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lal13g1394 FAR1 2.4e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1394 - K17604 lja:Lj0g3v0135969.1 330.102