Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1388 ATGGGCCAGGTTCAGAAGCATCTCAACCCGAACCAACCCATTCACACTTTTTTCAGGGTTTTTATTAAAACCTACGCTAACACTAATGTTCTTTGTTTCCGCCGTTCAGGTTCTTTCTCTCTTTCATTCCCTCTTTTTCTTCCAATTCACACATTAACTAAGCTACAAAGTGAAGCACTGAGAGAGGCGATATCTCAGATCGTAACAAATTCAAAGGAAAAGAAACGAAATTTCAATGAAACTATTGAACTTCAAATTGGTTTGAAAAATTATGATCCTCAAAAGGACAAGCGTTTCAGTGGTTCTGTTAAGCTTCCTCACATTCCTAGACCTAAGATGAAGATTTGCATGCTTGGTGATGCACAGCATGTTGAAGAGGCAGAAAAAATAGGGCTGGATTACATGGATGTAGAAGCTCTGAAAAAGCTTAATAAAAACAAGAAACTTGTCAAGAAGCTTGCCAAGAAGTATCATGCTTTTCTAGCATCTGAAGCTATCATCAAGCAAATTCCTCGTCTTCTGGGACCTGGTAAATTTCCAACATTGGTGAGCCATCAGGAATCCTTGGAGTCAAAAGTTAATGAAACAAAAGCAATGGTTAAGTTTCAACTGAAGAAGGTTCTTTGTATGGGTGTTGCGGTTGGAAATGTCGCGATGGAGGAGAAGCAGATTTTCCAGAATGTTCAACTCAGTGTCAATTTCCTTGTCTCATTATTGAAGAAAAACTGGCAAAATGTAAGTGAGATGCTTATACGTGAAGAGTACAATGGGGAGCGCAGTCCGCGTATTTTAGAGATCCATAAATCTTCTGTTACTAGGTAG 822 0.3905 MGQVQKHLNPNQPIHTFFRVFIKTYANTNVLCFRRSGSFSLSFPLFLPIHTLTKLQSEALREAISQIVTNSKEKKRNFNETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDAQHVEEAEKIGLDYMDVEALKKLNKNKKLVKKLAKKYHAFLASEAIIKQIPRLLGPGKFPTLVSHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQIFQNVQLSVNFLVSLLKKNWQNVSEMLIREEYNGERSPRILEIHKSSVTR 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1388 273 CDD Ribosomal_L1 60 251 IPR028364 -
Lal13g1388 273 Gene3D - 182 257 - -
Lal13g1388 273 Gene3D - 52 170 - -
Lal13g1388 273 PANTHER 60S RIBOSOMAL PROTEIN L10A-3 53 251 - -
Lal13g1388 273 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 53 251 - -
Lal13g1388 273 Pfam Ribosomal protein L1p/L10e family 72 251 IPR028364 -
Lal13g1388 273 SUPERFAMILY Ribosomal protein L1 63 252 IPR023674 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1388 Lal-Chr13 13177781 13180397 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g1388 52 246 Cytoplasmic Ribosomal Protein Gene Family AT1G08360 87.000 1.89e-110 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1388 K02865 - zju:107409964 338.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g1388 13 13177781 13180397 Lal13g1388 13 13177781 13180397 ECH