Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1382 ATGCTAGGGAAAAAGAAGGTGTCATTGAAGAAACTAGCCAAAAAAGTGAAGGCTTCTAGTAGTGCTAACCCTAAACATCACCACCAAGAATATTTGCTCAAAACAGATAAGGAAGAATCTTCCAAAACAGCAATTCCAACTGGTTCTTTTGCACTTTATGTGGGAGAAGAACGCCAAAGATATGTGGTTCCAACTAACTATCTTTCTCACCCTTTATTCAAAATGCTGCTTGAGAAGGCTTACAATGAATTTGGGTTTGCACAGAAGAATGGCCTTGCTGTTCCTTGCAGTGTTTCCACATTTCAGGAGGTGGTAAATGCTATAGAATGCAACATAGCCAACTTTAACTTGTGTAAAATTTATGAAGAAGTTGTTTAA 378 0.3783 MLGKKKVSLKKLAKKVKASSSANPKHHHQEYLLKTDKEESSKTAIPTGSFALYVGEERQRYVVPTNYLSHPLFKMLLEKAYNEFGFAQKNGLAVPCSVSTFQEVVNAIECNIANFNLCKIYEEVV 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1382 125 MobiDBLite consensus disorder prediction 23 41 - -
Lal13g1382 125 Pfam Auxin responsive protein 10 107 IPR003676 GO:0009733
Lal13g1382 125 MobiDBLite consensus disorder prediction 1 43 - -
Lal13g1382 125 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 124 IPR003676 GO:0009733
Lal13g1382 125 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY 1 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1382 Lal-Chr13 13104172 13104549 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g1382 45 115 Calmodulin-binding Proteins AT5G20810 49.296 4.92e-22 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1382 K14488 - gmx:100782364 150.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g1382 13 13104172 13104549 Lal13g1382 13 13104172 13104549 ECH