Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1339 ATGCTCCTAGAGGGTAATCAGAATATGAAAATAGCTAATTTTGGAGTTGCTCGTGTTGAAGCTATGAATCCAAGTGACATGACTGGTGAAACTCGAACACTTGGATATATGGCACCTGAGGCAAATGATGATGCAAGTATGTCTGGTATACCTTTGGGTGCAAGAGGATCATCTAAAGCCAGCAACATATAG 192 0.4115 MLLEGNQNMKIANFGVARVEAMNPSDMTGETRTLGYMAPEANDDASMSGIPLGARGSSKASNI 63
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1339 63 ProSiteProfiles Protein kinase domain profile. 1 63 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g1339 63 PANTHER KINASE LIKE PROTEIN 1 44 - -
Lal13g1339 63 SUPERFAMILY Protein kinase-like (PK-like) 2 43 IPR011009 -
Lal13g1339 63 MobiDBLite consensus disorder prediction 40 63 - -
Lal13g1339 63 Gene3D Transferase(Phosphotransferase) domain 1 1 50 - -
Lal13g1339 63 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1339 Lal-Chr13 12444286 12445503 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g1339 1 43 MAP Kinase Kinase Kinase AT4G14780 74.419 2.76e-17 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1339 - K01968 mtr:MTR_5g006560 75.0997