Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1332 ATGTCCCAATTGAACGGCGCTTACTACGGCCCCGCTATTCCGCCACCGCCCAAATATTACCGCCGCTCCGAAGGCCGCGGCTGCTGCTGCAACTGCCTCTGTGGCATAACCAGATGTTGTTGCGGTTGCATCTTCAGCATTATCTGCAAAATCTTAACCTTCATTCTCGTTCTCGTAGTTATCGCCGCTATTCTCATCTGGTTCATTGTTCGCCCCAACGTGTTGAAATTCCACGTCACCGAAGCCAACCTCACCGAATTCAACTACACCACCAGCGACAACATTAACAATGGAAGTCTTCACTACAATCTCGCTCTCAACATTTCGATCCGTAACCCGAATAGTAGACTCGGAATCTACTATGATTCCATTGAACCAAACGCGTTGTACGAGGGTGTTAGGTTCGGTTCACAGAATCTGGAACCGTTTTTTCAACATAAAAAATCGACAAGTTTCTTGGGCCCTGTTTTCAAAGGTGAACAGGTTATGTCGCTCGGAGAAACACAGGTTTCGAAGCTGAACAAGGAAAAGGAATCTGGTGTTTATGGAATCGGTGTTCAGCTGAAGATAAAGTTGAGATTCAAATTTGGTTTGATCAAGATTGGGAATTTCAATCCTAAGGTTCGTTGTGATTTGCAAGTTCCTTTGAAATCACATAATGGAACCCAACAGTTTCAAACCACTCAGTGTGGTTGGGATTACAAATCTATATTTCTGCATAAAGATTAG 729 0.4431 MSQLNGAYYGPAIPPPPKYYRRSEGRGCCCNCLCGITRCCCGCIFSIICKILTFILVLVVIAAILIWFIVRPNVLKFHVTEANLTEFNYTTSDNINNGSLHYNLALNISIRNPNSRLGIYYDSIEPNALYEGVRFGSQNLEPFFQHKKSTSFLGPVFKGEQVMSLGETQVSKLNKEKESGVYGIGVQLKIKLRFKFGLIKIGNFNPKVRCDLQVPLKSHNGTQQFQTTQCGWDYKSIFLHKD 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1332 242 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 22 234 - -
Lal13g1332 242 Pfam Late embryogenesis abundant protein 107 203 IPR004864 -
Lal13g1332 242 PANTHER OS05G0367900 PROTEIN 22 234 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1332 Lal-Chr13 12316428 12317156 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g1332 69 216 SNARE and Associated Proteins AT1G32270 35.135 1.96e-22 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1332 - - aprc:113873272 288.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g1332 13 12316428 12317156 Lal13g1332 13 12316428 12317156 ECH
Lal11g1265 11 16315977 16316654 Lal13g1332 13 12316428 12317156 PCT
Lal13g1332 13 12316428 12317156 Lal11g1265 11 16315977 16316654 PCT