Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1297 ATGAAGATTGAGAATGAAGAGATAAGAGCATGCCAACAAAGAGAACTAATGAAGCAAATAGAAGAGACTAGTTTCAAAGGGCCAGAAGCAAAGCCTGCAGGACCAAAGAAGCCTCACAATTTTAGAAGGCAAGCAAGTGCTGGTCTTAAAACAGAATCAGTTCTGCTGAGAAAAACAGGTAATCTCAGGGAGTTTTACGATTTAGGCCGAAAACTCGGAAAACGGCAATTTGGAACAACATTTCTTTGTGTAGAGAAAGCTAGTGGTAAAGAGTATGCTTGTAAGAGTATTGTGAAGAGGAAATTGGTGACAGATGAAGATGTTGAAGATGTGAGGAGGGAGATTCAGATAATGCATCATTTGGTGGGAAGTATCGATGTGATTTCGATCAAAGAGGCTTATGAGGATGTTGTTGCTGTTCATGTTGTGATGGAATTGTGTGCAGGGGGTGAACTTTTTGATAGGATTGTGGAAAGAGGACATTATAGTGAAAGAAAGGCTGCAAAACTTGCAAGGACTATTATTAGTGTTATTGAGTCTTGTCATTCCCTTGGAGTTATGCATAGAGATCTTAAGCCTGAGAATTTTCTTTTCATCAATCACGACGAAGATTCTCCTCTTAAGGCAATTGATTTTGGATTGTCTACTTTTTTCAAACCAGGAGACATTTTCAATGATGAGGTGGGAAGTCCTTATTATGTTGCACCTGAAATTTTACTGAAGCGTTATGGTCCAGAAGCAGATGTGTGGAGTGCTGGTATTATCATATACATTCTCTTATGTGGTTTGCCTCCATTTTGGGGTGAATCAGAGGCAGATATATTTGAGGCTATTTTGCATGGTGAAGCAGATTTCACTTCAGATCCTTGGCCTACTATATCTGAAAGCGCAAAAGACTAG 900 0.3944 MKIENEEIRACQQRELMKQIEETSFKGPEAKPAGPKKPHNFRRQASAGLKTESVLLRKTGNLREFYDLGRKLGKRQFGTTFLCVEKASGKEYACKSIVKRKLVTDEDVEDVRREIQIMHHLVGSIDVISIKEAYEDVVAVHVVMELCAGGELFDRIVERGHYSERKAAKLARTIISVIESCHSLGVMHRDLKPENFLFINHDEDSPLKAIDFGLSTFFKPGDIFNDEVGSPYYVAPEILLKRYGPEADVWSAGIIIYILLCGLPPFWGESEADIFEAILHGEADFTSDPWPTISESAKD 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1297 299 Pfam Protein kinase domain 66 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g1297 299 CDD STKc_CAMK 65 299 - -
Lal13g1297 299 ProSiteProfiles Protein kinase domain profile. 66 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g1297 299 ProSitePatterns Serine/Threonine protein kinases active-site signature. 186 198 IPR008271 GO:0004672|GO:0006468
Lal13g1297 299 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 2 22 299 - -
Lal13g1297 299 Gene3D Transferase(Phosphotransferase) domain 1 152 299 - -
Lal13g1297 299 SUPERFAMILY Protein kinase-like (PK-like) 64 299 IPR011009 -
Lal13g1297 299 PANTHER SERINE/THREONINE-PROTEIN KINASE 22 299 - -
Lal13g1297 299 SMART serkin_6 66 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g1297 299 MobiDBLite consensus disorder prediction 24 44 - -
Lal13g1297 299 Gene3D Phosphorylase Kinase; domain 1 68 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1297 Lal-Chr13 11693070 11698512 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g1297 21 299 EF-hand Containing Proteins AT3G10660 74.552 4.20e-156 449
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lal13g1297 Pkinase 3.2e-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1297 K13412 - gmx:100800415 481.485