Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1282 ATGGTTTTTCGGGTTGCATTGCATGCAATCGAAACTAAGATTTGTTTTTTCAAGCTTTCCAAAAATAACGGTCCATGGCGTCGTCCAGAGAGTGGAAGAGAACAACGCGGTGGTGGTGAAGGGTATTTAGAAATTTTGATGGGTAACAACTGCGTGGGGCCAAACTCCCTCGGCGGGAATGGGTTCCTGCAATCCGTTTCAGCGGCAGTCTGGAAAACTCGCCCGCCGGAGGCAAGGCTTCCGCCGCCAAATGACGCCTCTGCCGAAGCCGCAACCACCGACAACAATAACAAATCCACGGCGTCACTGCCGAATGATGCCTCCAAAGATTCATCTGTTGGCAAAGGTTCCGACGGTTCCAAAGGCCATAATGATCCTCCCATGCCGGTTCAGAGCACCCCACCTGAATCGGTTAAAATAGCAGCAGCGGAAACAAAACCGATGCCGGTTCAACCAGAGAAGCCGGTTAAACCGGTGGTAAATAATGGACTGGCACCGGTTAATATTGGCGCTGGCCCCGGCGGCGGCGGCGGTGGTGGTGGTGGTGATGAAGGAAAAGCTAAGAAACCTACTCATGTTAAAAGGGTTTCAAGTATGGGGCTTCAAGTGGAATCTGTGTTGGGTAGGAAAACTGGGAACTTGAAAGATATTTATAGCTTGGGGAGGAAGTTAGGGCAAGGGCAATTTGGTACAACATTTTTGTGTGTGGAGAAAGGAACTAATAAAGAGTTTGCATGCAAATCTATTGCCAAGAGGAAATTAACAACCCAAGAAGATGTTGAAGATGTTAGAAGGGAGATTCAGATAATGCACCACATGGCTGGGCACCCAAATGTGATACAAATAATTGGTGCTTATGAAGATGCTGTTGCTGTACATGTTGTTATGCAGCTTTGTGCTGGTGGAGAACTTTTTGATAGGATCATACAGAGAGGACATTACACTGAGAAAAAAGCTGCTGAACTTGCTAGGTTGATTGTTAGTGTTGTTGAGGCTTGTCATTCTTTAGGTGTCATGCATAGGGACTTGAAGCCTGAGAATTTCCTCTTCATTAACCATGAAGAAGAATCGCCACTTAAGACAATAGATTTCGGTCTCTCTGTGTTCTTTAGACCAGGTGAAACATTTACTGATGTGGTTGGGAGCCCATACTATGTTGCCCCTGAAGTTTTGAGGAAGCAATATGGTCCAGAATGTGATGTTTGGAGCGCTGGGGTTATCATTTATATTTTACTAAGTGGAGTTCCTCCATTTTGGGATGAAACGGAACAAGGAATATTTGAGCAAGTTTTGAAAGGAGAACTTGACTTTATTTCTGAACCATGGCCTAGCATCTCTGGAAGTGCAAAGGATCTCGTTCGCCGAATGCTTATAAGGGATCCTAAGAAGCGCTTGACAGCACATGAAGTTCTTTGCCACCCCTGGGTTCAGGTTGGAGGTGTTGCTCCTGATAAACCACTTGATTCTGCTGTGTTGTCTCGTTTGAAGCAATTTTCTGCAATGAATAAGCTCAAAAAAATCGCCATTCGAGTAATTGCGGAAAGTCTGTCAGAGGAGGAAATTGCAGGACTGAAAGAAATGTTCAGGATGATAGACACTGATAATAGTGGACAGATCACTCTTGAGGAACTGAAAAATGGTTTGGAGAGAGTGGGCTCTGTTCTTAAAGATTCAGAAATTAATTGGTTAATGCAAGCAGCAGATGTAGATAACAGTGGTACAATAGACTATGGTGAATTCATAGCAGCTATGATTCATCTAAACAAGGTCCAAAAGGAGGATCATCTATTTGCAGCCTTCTCTTACTTTGACAAAGATGGGAGTGGATACATTACAAAGGATGAACTCCAACAAGCCTGTGTGCAGTTTGGCCTAAAAGATGATCACTTAGATGATATAATACGTGAAGTTGACAAGGATAATGATGGACTCATTGATTACAATGAGTTTGCTGCAATGATGCAAGACACTGGTTTTGGCAAACTACAAATAGTTTGA 1998 0.4394 MVFRVALHAIETKICFFKLSKNNGPWRRPESGREQRGGGEGYLEILMGNNCVGPNSLGGNGFLQSVSAAVWKTRPPEARLPPPNDASAEAATTDNNNKSTASLPNDASKDSSVGKGSDGSKGHNDPPMPVQSTPPESVKIAAAETKPMPVQPEKPVKPVVNNGLAPVNIGAGPGGGGGGGGGDEGKAKKPTHVKRVSSMGLQVESVLGRKTGNLKDIYSLGRKLGQGQFGTTFLCVEKGTNKEFACKSIAKRKLTTQEDVEDVRREIQIMHHMAGHPNVIQIIGAYEDAVAVHVVMQLCAGGELFDRIIQRGHYTEKKAAELARLIVSVVEACHSLGVMHRDLKPENFLFINHEEESPLKTIDFGLSVFFRPGETFTDVVGSPYYVAPEVLRKQYGPECDVWSAGVIIYILLSGVPPFWDETEQGIFEQVLKGELDFISEPWPSISGSAKDLVRRMLIRDPKKRLTAHEVLCHPWVQVGGVAPDKPLDSAVLSRLKQFSAMNKLKKIAIRVIAESLSEEEIAGLKEMFRMIDTDNSGQITLEELKNGLERVGSVLKDSEINWLMQAADVDNSGTIDYGEFIAAMIHLNKVQKEDHLFAAFSYFDKDGSGYITKDELQQACVQFGLKDDHLDDIIREVDKDNDGLIDYNEFAAMMQDTGFGKLQIV 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1282 665 CDD STKc_CAMK 218 475 - -
Lal13g1282 665 ProSiteProfiles EF-hand calcium-binding domain profile. 591 626 IPR002048 GO:0005509
Lal13g1282 665 MobiDBLite consensus disorder prediction 75 196 - -
Lal13g1282 665 ProSiteProfiles EF-hand calcium-binding domain profile. 519 554 IPR002048 GO:0005509
Lal13g1282 665 SMART efh_1 523 551 IPR002048 GO:0005509
Lal13g1282 665 SMART efh_1 595 623 IPR002048 GO:0005509
Lal13g1282 665 SMART efh_1 629 657 IPR002048 GO:0005509
Lal13g1282 665 SMART efh_1 559 587 IPR002048 GO:0005509
Lal13g1282 665 ProSiteProfiles EF-hand calcium-binding domain profile. 555 590 IPR002048 GO:0005509
Lal13g1282 665 ProSiteProfiles EF-hand calcium-binding domain profile. 627 660 IPR002048 GO:0005509
Lal13g1282 665 ProSitePatterns EF-hand calcium-binding domain. 532 544 IPR018247 -
Lal13g1282 665 SUPERFAMILY Protein kinase-like (PK-like) 218 477 IPR011009 -
Lal13g1282 665 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 2 107 658 - -
Lal13g1282 665 ProSitePatterns Serine/Threonine protein kinases active-site signature. 338 350 IPR008271 GO:0004672|GO:0006468
Lal13g1282 665 ProSitePatterns EF-hand calcium-binding domain. 568 580 IPR018247 -
Lal13g1282 665 Gene3D Phosphorylase Kinase; domain 1 220 303 - -
Lal13g1282 665 Pfam Protein kinase domain 218 476 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g1282 665 ProSitePatterns Protein kinases ATP-binding region signature. 224 251 IPR017441 GO:0005524
Lal13g1282 665 ProSitePatterns EF-hand calcium-binding domain. 638 650 IPR018247 -
Lal13g1282 665 ProSitePatterns EF-hand calcium-binding domain. 604 616 IPR018247 -
Lal13g1282 665 Pfam EF-hand domain pair 594 655 IPR002048 GO:0005509
Lal13g1282 665 Pfam EF-hand domain pair 524 584 IPR002048 GO:0005509
Lal13g1282 665 PANTHER SERINE/THREONINE-PROTEIN KINASE 107 658 - -
Lal13g1282 665 SUPERFAMILY EF-hand 516 655 IPR011992 -
Lal13g1282 665 ProSiteProfiles Protein kinase domain profile. 218 476 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g1282 665 Gene3D Transferase(Phosphotransferase) domain 1 304 480 - -
Lal13g1282 665 SMART serkin_6 218 476 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g1282 665 Gene3D - 483 657 - -
Lal13g1282 665 MobiDBLite consensus disorder prediction 88 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1282 Lal-Chr13 11446046 11455906 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g1282 47 662 EF-hand Containing Proteins AT2G38910 72.240 0.0 894
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lal13g1282 Pkinase 3.1e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1282 K13412 - gmx:100813232 998.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g1282 13 11446046 11455906 Lal13g1282 13 11446046 11455906 ECH