Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1136 ATGGCAACTGCGGGCGTTAGAGAAATTATTCCTCCTTCTTTAACTTCCAATTCGGAACCACCTCCTCTTTTTGACGGAACCACCAGATTGTACACCAGTTATATTTGTCCCTTTGCTCAACGTGTATGGATCACCAGAAACTATAAGGGGCTACAAGATAAGATCAAATTGGTCGCTATTGACCTACAAGACAGGCCTCCTTGGTATAAGGAGAAGGTCTACCCTGAAAATAAGGTGCCATCATTGGAGCACAATGGAAAGATATTGGGGGAAAGTCTTGATTTGGTGAAATATGTAGATGCCAATTTTGAAGGACCATCTTTGATTCCCACTGATCCTGCCAAGAAAGAGTTTAGTGAGAAGGTTATATCCTATGTTGATACATTCACCAGAGAACTTTTCACTTCACTGAAAGGAGATGCTGTACAACAAGCCAGTCCTGCTTTTGATTACTTGGAAGATGCTCTTGGTAAATTCGATGACGGGCCATTCATCCTTGGTCAGTTTAGCTGGTTGGATGTTGCCTACATTCCGTTTGTTGAAAGATTCCAAGTTGTCTTTTCCGATATTTTCAAGCATGACATAACGGAAGGAAGGCCTAAACTTGCAGCATGGATTGAGGAGTTGAACAAGATTGATGCTTATGCACACACAAAAGTTGATCCTCAGGAAACAGTTGAAATTTTCAAGAAACTCTCAACAGTGAACGTTGAATTGCAGCAAGTGAATTCAAAGATGAAGACTGTGGCGAATAAATCGTCATTTGTAGTAAAAGTGGAATAA 783 0.4074 MATAGVREIIPPSLTSNSEPPPLFDGTTRLYTSYICPFAQRVWITRNYKGLQDKIKLVAIDLQDRPPWYKEKVYPENKVPSLEHNGKILGESLDLVKYVDANFEGPSLIPTDPAKKEFSEKVISYVDTFTRELFTSLKGDAVQQASPAFDYLEDALGKFDDGPFILGQFSWLDVAYIPFVERFQVVFSDIFKHDITEGRPKLAAWIEELNKIDAYAHTKVDPQETVEIFKKLSTVNVELQQVNSKMKTVANKSSFVVKVE 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1136 260 CDD GST_C_Lambda 112 230 - -
Lal13g1136 260 SUPERFAMILY GST C-terminal domain-like 103 232 IPR036282 -
Lal13g1136 260 Pfam Glutathione S-transferase, N-terminal domain 30 106 IPR004045 -
Lal13g1136 260 SFLD Main (cytGST) 29 210 - -
Lal13g1136 260 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 26 107 IPR004045 -
Lal13g1136 260 SFLD Glutathione Transferase (cytosolic) 29 210 IPR040079 -
Lal13g1136 260 PANTHER GLUTATHIONE S-TRANSFERASE L1 1 231 IPR044629 GO:0004364
Lal13g1136 260 Gene3D Glutaredoxin 1 104 - -
Lal13g1136 260 Pfam Glutathione S-transferase, C-terminal domain 141 207 - -
Lal13g1136 260 SUPERFAMILY Thioredoxin-like 17 108 IPR036249 -
Lal13g1136 260 Gene3D - 105 237 - -
Lal13g1136 260 PANTHER GLUTATHIONE S-TRANSFERASE TAU 1 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1136 Lal-Chr13 8680905 8684008 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g1136 11 231 Glutathione S-transferase Gene Family AT5G02790 67.873 4.62e-116 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1136 K00799 - gmx:100793025 397.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g1136 13 8680905 8684008 Lal13g1136 13 8680905 8684008 ECH
Lal20g0074 20 497088 499986 Lal13g1136 13 8680905 8684008 PCT
Lal13g1136 13 8680905 8684008 Lal20g0074 20 497088 499986 PCT