Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1107 ATGGACAAATCTCGCTTCAACAACTTCAACCTTGCTTCATCCAACCAACCTCAAGGGAGCAAGCAGATTCATAGAACGGGACGGCTTAGGAATTTGTCTCCTGATTCTGGCTCCAATGGTGACGACAAAGATTCCTTCTTGTTTAAATTTGGGTGGAAATCTTCAAAACAACGGTCTGGAACTCCCATTAAGAAGTTAATAGCTGAAGAGATGACAGGAGAAACGGAATCCAAAAGAAGATCGCCGGGTGTCGTTGCTAGATTGATGGGTCTTGATGGGTTGCCGTTTCAGCAGTCTGCAAATAAGCAACATAAGAGCTCCCCTGGAAACCATCTACAAAGAGCAACACTATTGGAGAAAAATCGATGTAGAGGAACATCGTATGATGGTGGCCGATCATCTAGGAGAAGTTCAAAAGATCAGCAAGAATTTAAGGATGTATTTGAGGTCTCGGATATCGCAAAGGTAGAGAGCAATAGATATTCGATGCAGGGGTCTTCAGACTTGAAGATCACTGATGCTGAAATGTCATTCATCGAACAGAAGTTCATGGATGCCAAACGCCTTGCGACATTTCAGGATTTACAGTCGTCAAAGGATTTCCTTGATACACTTGAGGTTCTGGACTCTAACAAAGATCTTCTACTAAAATACTTTAAGCAGCCAGATTCTTTGTTTAAAAAGCATCTGAATGATCTGCAAGCTGCCCCTTCCGAATCAAATTTGGGTCATGTAGAAGCTATAAAATTATCGGATATTGAGAAGTATGAACATGAATTCAACTGGAAGTCATATAGGGAAACAACAAGGTTCAGTTACAGTAGATCTCATTACAAGCATGGTGATGGTTATCCTTCCCACATCGACAGAAGACATGCCATGCATAGTTCACCAAAATCATCAAAGCTTCAGTTCAAGGAAAGAGATATAAAAGATTCAGTCCCCACAAAGATTGTTGTCCTAAAACCTAATCTTGGAAAAGTTCAGAATGGTACTAGAATTGTTTCATCACCATTTTCATCACATACTTTTCCGGTACAGCATGGAAACGACACTGAATTTCCAGATGTCAGATTTAGGGACACTGAACAGTATCAAATGAAAGTTTTGCCCGATACTGCCAGGCATTCGAGGCAAAATTCTTTGGAATCTAGAGAAATTGCAAAGGAAATCACTAGGCAAATGAAAAGTAGTTTGAACAATGGCTGCATGATTTCCTCTTCTAAATTTAGAGGATATGTTGGGGATGATAGTTCTTGTAGTGCTTCTGGGAATGAATCTCCAGGTGAATCAGTAGAAACACCTGCAACTTGGGGAACCCCAATTGATCTGAATAGCCGTAGCAGGCAGTCATCTCATTCTAGTGAATCATCTGTGAGTAGAGAGGCAAAGGAGAGATTATCAGAGAGGTGGAAAGTGGCACACAAGTCTCAAGAGGTTCAAGCCATCAATAGAAGCACACTAGCTGAAATGCTTGCTAACCCTGATAAGGAAATGAAGGTTGCAAGTTCTGACAGCGTGTCTATTGGTGAAAGTTCCCGTAATAGACTTTCCTGCAATGGTGAACCTGCTAGGCGGGTTGAACCATTGGGTATCAGCAGCAGGGATGGTTGGAAAGATGGATATATTGGAATTTTACCAAGGTCAAAGTCTCTTCCTGCTTCATCTACTGCCTTTGGAAGCCCTAGAACAATCTTGCCAAATGAAGTATTTCGTGATGAACGATTAATGATGCCAATGGAAGCCTTTAAATGGGAGAGGAAAAGAGCAGCTAAGAGTCGTGATCAGAGACATGGTGCGAACACTAGAAGCACAAAATATGGACACAAAAAGCCTTGTTCTTTGCATTCATCAAATGTAGATGGTAATGAGTTTTCACTAGACTTGGATACAATTAAGAACAAAATGAAGATCAATCTTGAAGAAGATTCACCTAAGGTAGAAGTTCTGGTCACCGGATCCTTTGCCAGCATCCCCAGAGATACAATTGAAGTTATTGATGACGTTGTGGATGTGGCAACTGAAATAGCAGTTGGTTCTTCTGAATCTGAACCTTCTGAGAAGGTGGTTCTTGAATTATCTTCATGTGAAATAATCAAAGCCAACACTGATGATGCTGACAAAGACAATTCAATGCAGCAGGAACTATCAGCTGAATCTTCATGCTGCAAAGATGCTGATCAGCCCAGTCCAGTCTCAGTCCTGGAACCTTCTTTTACAGATGATCTGTCATCTTGTTCTGATTGTTTTGGAAGTCTCAGCGCTGACCTACAAGGGCTCCGAATGCAGCTCCGGTTATTGAAGTCTGAATCTGAAGAAAATGTGGATGGACCAAGTGACGAAGATGGCGGGGAAGCATCTACTGGAATTTCAGAAGACAACGGATTATGGAGAACTGAAGATAGCTGGGAGTCTTCCTACATATTTGATGTATTGTCTGAATCTGGCATTGATGGAGCTCAGCCCATTTCGAATTCTTTCGATTCCCCAGTGAATCTTTCCGTGTTTGATGAACTTGAAAAGAGGTACTCTGACCAGACTACTTGTTCAAGGTCTGAAAGGAGATTGTTTTTCGACAGTATAAATTCCGGAATCATCGACATCCACGAGCAATCCGTGAATGCACTGCCATGGGTGAGCTTCAAAACCAAAACTATTAGTTCTAAATTGGCTGAAACCGGGCTCCAAGATAGTCTTTACAGGTTGCTTGGGAGCCAAGCAAAAGTAAAGGATGATGATGCTATGGGGAAGGTGCTGGTTATGGAATCTCAATGGTTGGACTTAAAAAATGACATTGATGTAATAGGCAACGAAGTTGAGATTATGTTGTTAGATGATCTAGTTGCAGAGATATCCAGTATGTAG 2865 0.415 MDKSRFNNFNLASSNQPQGSKQIHRTGRLRNLSPDSGSNGDDKDSFLFKFGWKSSKQRSGTPIKKLIAEEMTGETESKRRSPGVVARLMGLDGLPFQQSANKQHKSSPGNHLQRATLLEKNRCRGTSYDGGRSSRRSSKDQQEFKDVFEVSDIAKVESNRYSMQGSSDLKITDAEMSFIEQKFMDAKRLATFQDLQSSKDFLDTLEVLDSNKDLLLKYFKQPDSLFKKHLNDLQAAPSESNLGHVEAIKLSDIEKYEHEFNWKSYRETTRFSYSRSHYKHGDGYPSHIDRRHAMHSSPKSSKLQFKERDIKDSVPTKIVVLKPNLGKVQNGTRIVSSPFSSHTFPVQHGNDTEFPDVRFRDTEQYQMKVLPDTARHSRQNSLESREIAKEITRQMKSSLNNGCMISSSKFRGYVGDDSSCSASGNESPGESVETPATWGTPIDLNSRSRQSSHSSESSVSREAKERLSERWKVAHKSQEVQAINRSTLAEMLANPDKEMKVASSDSVSIGESSRNRLSCNGEPARRVEPLGISSRDGWKDGYIGILPRSKSLPASSTAFGSPRTILPNEVFRDERLMMPMEAFKWERKRAAKSRDQRHGANTRSTKYGHKKPCSLHSSNVDGNEFSLDLDTIKNKMKINLEEDSPKVEVLVTGSFASIPRDTIEVIDDVVDVATEIAVGSSESEPSEKVVLELSSCEIIKANTDDADKDNSMQQELSAESSCCKDADQPSPVSVLEPSFTDDLSSCSDCFGSLSADLQGLRMQLRLLKSESEENVDGPSDEDGGEASTGISEDNGLWRTEDSWESSYIFDVLSESGIDGAQPISNSFDSPVNLSVFDELEKRYSDQTTCSRSERRLFFDSINSGIIDIHEQSVNALPWVSFKTKTISSKLAETGLQDSLYRLLGSQAKVKDDDAMGKVLVMESQWLDLKNDIDVIGNEVEIMLLDDLVAEISSM 954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1107 954 MobiDBLite consensus disorder prediction 1 40 - -
Lal13g1107 954 PANTHER AFADIN 35 952 - -
Lal13g1107 954 MobiDBLite consensus disorder prediction 588 602 - -
Lal13g1107 954 MobiDBLite consensus disorder prediction 282 306 - -
Lal13g1107 954 MobiDBLite consensus disorder prediction 415 457 - -
Lal13g1107 954 Pfam Protein of unknown function (DUF3741) 180 224 IPR022212 -
Lal13g1107 954 Pfam Domain of unknown function (DUF4378) 805 950 IPR025486 -
Lal13g1107 954 PANTHER AFADIN 35 952 - -
Lal13g1107 954 MobiDBLite consensus disorder prediction 122 143 - -
Lal13g1107 954 MobiDBLite consensus disorder prediction 769 795 - -
Lal13g1107 954 MobiDBLite consensus disorder prediction 415 463 - -
Lal13g1107 954 MobiDBLite consensus disorder prediction 1 86 - -
Lal13g1107 954 Pfam DUF761-associated sequence motif 72 98 IPR032795 -
Lal13g1107 954 MobiDBLite consensus disorder prediction 588 615 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1107 Lal-Chr13 8424055 8429076 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g1107 59 951 TRM (TON1 Recruiting Motif) Superfamily AT3G53540 37.705 8.01e-137 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1107 - - ccaj:109788117 1176.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g1107 13 8424055 8429076 Lal13g1107 13 8424055 8429076 ECH
Lal13g1107 13 8424055 8429076 Lal24g0834 24 6673714 6678610 LSH