Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1097 ATGCCTTTCCACAGCCAAGCATTTTGGATGGCAAAGAGTCCTGGGTGTTTGGATGACGGTGACATGACTCATGACAATTCTTCTAGAAATGAGTCCAAGCGTGCTCATCAGTGGTCCATGGATGGCCCTGAAGTGGATCTGTTTCCCAATAAGAAGCAGGAAGTGGAAGCCCCGAACAATTTATTACCAGGAATTCCCAGCTCCAGTATTTCTTCATGGGGAGATCCGTCAAGTTATCACACTTTGACTGGTCATTTTACTCAACAATTATTTGATTTAGATTCAGCAACTATGAACTTTGAAGACAGAAACATTTCCTCTGTTATCATAGATAATAAGTTGAGTACAGAAAGAAAGGATAACATGGATCCCTTTGGGGGTGATTCCTTGTTTGGTTTATCCACGTCTAATACATTGCAATATCCTCAACTAGATTTTAATTATGATGGAATCAGAAAAGTTAAAGTTATTGAGGTGAATGAATCTGACAATGTCGTGTCTGTTCATACAAATAATCCCTATGTTAGGGAAGTTAGCAGCACTCTGTCAAATGGTCAAGAATACACTGGAGGCGATAATTCAATATCAACATGTCTTTCCTACAACAATGGGGGTGCCGATATAATATCTATGGATGACACTTATGGTAGGATGGATAACAATTTGTTGTCAATGGGTCAATCTTATAACAAGGGAAACAACGGGTTATCTATTCATCAAACATACAAAGAGATTTGTAATACAATATCAATGTATCAAGGATTCAGCAAGGTCGATAGTAATGTGATATCTATTGCCCAATCTTACAACAAGGATGATGACAATTCCATGTCAAGAGACCACTTATTCAGTAAAGTTGAAAATGGGACCATATCGATGGGTCACGCCTATTGCAATGGGGGAAATAACATGCCATTTATTTCTCATTCTTATAACAAAGGAGAGAGCACTATCATATCCTTTGGTGGATGTGACGATGATACAACTCCGTCTGACTTGTTCATTTCCAGCTATGAACTGTTGATGGGTCAAGCACCTTCAAATAACTCAGAAGCTGCGAGTGTGAATGAGTTGGTTTGTTCTAATTCTAACTTGCTTTCAAGTGCAGCACAGGCATCTGCATCTGCAAATGTTTCCAACAGAAAGGGTGAGCTAAAAACGTCCAAGAAAGCTACTTCGAATAACTTCCCTTCAAATGTCAGAAGTTTGCTATCCACTGGTATGCTGGATGGTGTCTCCGTAAAGTATAAGGCTTGGTCGCAGGAGGAACTTCGAGGTGTTATAAAAGGTGCTGGGTATTTATGCAGCTGTGAGATGTGTAATTTTTCCAAGGTTATTAATGCATACGAGTTTGAACGGCATGCTGGTTGCAAGACAAAACACCCGAATAATCATATATACTTCGACAACGGGAAAACTATATATGGGGTTGTACAAGAGCTAAGGGGCACTCCTCAGAACATGTTATTTGATGTTATTCAGACAATAACTGGTTCTCCTATCAACCAGAAATCCTTCTGTATTTGGAAAGAATCCTTTATGGCTGCTGCACTTGAACTTAAGCGCATATGTAGAAAAGATGAAGTGAATCAACTGTTATAA 1602 0.3926 MPFHSQAFWMAKSPGCLDDGDMTHDNSSRNESKRAHQWSMDGPEVDLFPNKKQEVEAPNNLLPGIPSSSISSWGDPSSYHTLTGHFTQQLFDLDSATMNFEDRNISSVIIDNKLSTERKDNMDPFGGDSLFGLSTSNTLQYPQLDFNYDGIRKVKVIEVNESDNVVSVHTNNPYVREVSSTLSNGQEYTGGDNSISTCLSYNNGGADIISMDDTYGRMDNNLLSMGQSYNKGNNGLSIHQTYKEICNTISMYQGFSKVDSNVISIAQSYNKDDDNSMSRDHLFSKVENGTISMGHAYCNGGNNMPFISHSYNKGESTIISFGGCDDDTTPSDLFISSYELLMGQAPSNNSEAASVNELVCSNSNLLSSAAQASASANVSNRKGELKTSKKATSNNFPSNVRSLLSTGMLDGVSVKYKAWSQEELRGVIKGAGYLCSCEMCNFSKVINAYEFERHAGCKTKHPNNHIYFDNGKTIYGVVQELRGTPQNMLFDVIQTITGSPINQKSFCIWKESFMAAALELKRICRKDEVNQLL 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1097 533 PANTHER AUTOIMMUNE REGULATOR 6 531 - -
Lal13g1097 533 Pfam Tify domain binding domain 426 481 IPR032308 -
Lal13g1097 533 MobiDBLite consensus disorder prediction 18 40 - -
Lal13g1097 533 MobiDBLite consensus disorder prediction 15 43 - -
Lal13g1097 533 PANTHER PROTEIN, PUTATIVE-RELATED 6 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1097 Lal-Chr13 8297172 8301311 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g1097 376 513 PHD Transcription Factor Family AT3G53680 53.237 9.20e-41 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1097 - - mtr:MTR_1g067750 674.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g1097 13 8297172 8301311 Lal13g1097 13 8297172 8301311 ECH
Lal13g1097 13 8297172 8301311 Lal9g0236 9 1458529 1462004 ECH