Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1096 ATGGAGAATCACCAAACACAACATTGGGTTGAAAAAGCAAAACCATTCATAGCAGTGATATTTTTGCAGTTTGGATTTGCAGGTGTGGATGTTCTATTCAAGGCTGCAATGAACAAAGGGATGAGTAACTATGTACTAGTCGTTTATCGACACGCTATCGCGTTCATAGTCATAACTCCTTTTGCATTCATTCTTGACAAGCCAGTTATTGATCAGAATTTGTATTTTTTGGGGATGAAGTACACAACTGCAACTTTTGCAGTTGCAATGACCAATATAATTCCTGCAATTACCTTCTTCATGGCTTACATCCTTAGGATTGAGAAGATAACAATAAAAAGTATACGAAGCCAAGCAAAAGTGGTTGGAACTCTAGTAACTGTTTCTGGTGCCATGGTTATGACATTGATGAAAGGTGCATCACTTGGGTCTTTGGGGACACATGTAGACAACAATCACAACCACCAGCACAATAGTGGGCCAAATATTCAACATACAATAAAGGGAACCATTATGATTATAACTGGATGCTTTAGTTGGTCTTGTTTTGTTATCATTCAATCTATTACCCTTGATACCTACCCTGCTGAGCTTTCTCTTACATCATTGATATGCCTATTGGGATCAATTGAAGGTGCTATAGTGGCTATGATTATAGAAAGGGGAAACTCTTCAGTTTGGTTTGTGAAATGGGATATTAAATTAGTGGCTATTATCTACAGTGGCATAGTTGGTTCAGGACTGACTTATTATGTGCAAGGAGTAGTGATGCAAACAAAAGGCCCAGTTTTTGTAACAGCATTTAGTCCCCTCTGCATGATAATTGTTGCTATCTTGAGCTCTATCATTCTTGCTGAGCAATTGTTTCTTGGAAGGGTGATTGGTGCCATTATTATTGTTTTAGGTCTGTACCTTGTGGTTTGGGGTAAAAGCAAAGATCAGAACACAAGACAAATTTCCAAAGAACCAATTTTGGTGGATAAACAAAATGCAGAAGAGAGCAATAATGAGAGAATGGACCATTGTAATGACGAGGTCCTCACTATTGGTAGTTCTGGAGTTAGAATCACAACTCAAGATTAA 1083 0.3804 MENHQTQHWVEKAKPFIAVIFLQFGFAGVDVLFKAAMNKGMSNYVLVVYRHAIAFIVITPFAFILDKPVIDQNLYFLGMKYTTATFAVAMTNIIPAITFFMAYILRIEKITIKSIRSQAKVVGTLVTVSGAMVMTLMKGASLGSLGTHVDNNHNHQHNSGPNIQHTIKGTIMIITGCFSWSCFVIIQSITLDTYPAELSLTSLICLLGSIEGAIVAMIIERGNSSVWFVKWDIKLVAIIYSGIVGSGLTYYVQGVVMQTKGPVFVTAFSPLCMIIVAILSSIILAEQLFLGRVIGAIIIVLGLYLVVWGKSKDQNTRQISKEPILVDKQNAEESNNERMDHCNDEVLTIGSSGVRITTQD 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1096 360 SUPERFAMILY Multidrug resistance efflux transporter EmrE 227 312 - -
Lal13g1096 360 PANTHER WAT1-RELATED PROTEIN 10 67 - -
Lal13g1096 360 PANTHER WAT1-RELATED PROTEIN 67 326 - -
Lal13g1096 360 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 136 - -
Lal13g1096 360 Pfam EamA-like transporter family 168 307 IPR000620 GO:0016020|GO:0016021
Lal13g1096 360 PANTHER WAT1-RELATED PROTEIN 67 326 IPR030184 GO:0016021|GO:0022857
Lal13g1096 360 PANTHER WAT1-RELATED PROTEIN 10 67 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1096 Lal-Chr13 8292547 8296309 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g1096 1 353 Nodulin-like Gene Family AT2G37460 54.642 6.19e-143 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1096 - - ahf:112727266 472.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g1096 13 8292547 8296309 Lal13g1096 13 8292547 8296309 ECH
Lal1g1849 1 20761279 20768588 Lal13g1096 13 8292547 8296309 PCT
Lal13g1096 13 8292547 8296309 Lal1g1849 1 20761279 20768588 PCT