Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1072 ATGGCTAGCTGCAACATAGCATCATTTGCATCTGGATTTCTCTTGTCTCCTAATGTTGCATCAAACTCACCATCTTCCAGGAACACCACTATGGTTATGTTCCCAACAAAGAACAATCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTAGGCTTGTTGTAAGGGCTGAAGATGATGCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCACCTGCAACTGTTACTACTCCAGTAGAAGGAGAAGTAGCTAAAAAACCCAAGCCACCACCAATTGGTCCCAAGAGAGGTTCTAAGGTGAAGATTCTTAGGAGGGAATCCTATTGGTACAAAGAAACTGGTTCAGTTGTTGCTGTTGATCAGGACCCCAAGACTCGCTACCCGGTTGTGGTAAGATTCAACAAAGTTAACTATGCCAATGTATCAACAAACAACTATGCTTTGGATGAGATTGAGGAAGTTAAATGA 471 0.4225 MASCNIASFASGFLLSPNVASNSPSSRNTTMVMFPTKNNLSSSSSSSSSSSRLVVRAEDDAASASASASASAPATVTTPVEGEVAKKPKPPPIGPKRGSKVKILRRESYWYKETGSVVAVDQDPKTRYPVVVRFNKVNYANVSTNNYALDEIEEVK 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1072 156 MobiDBLite consensus disorder prediction 17 100 - -
Lal13g1072 156 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT IV A 1 156 - -
Lal13g1072 156 Pfam Photosystem I reaction centre subunit IV / PsaE 96 155 IPR003375 GO:0009522|GO:0009538|GO:0015979
Lal13g1072 156 Gene3D - 89 156 - -
Lal13g1072 156 MobiDBLite consensus disorder prediction 17 54 - -
Lal13g1072 156 SUPERFAMILY Electron transport accessory proteins 95 155 IPR008990 -
Lal13g1072 156 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT IV A, CHLOROPLASTIC-RELATED 1 156 IPR003375 GO:0009522|GO:0009538|GO:0015979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1072 Lal-Chr13 8018208 8020286 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1072 K02693 - rcu:8262788 191.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g1072 13 8018208 8020286 Lal13g1072 13 8018208 8020286 ECH
Lal12g0877 12 7210190 7213565 Lal13g1072 13 8018208 8020286 LSH
Lal13g1072 13 8018208 8020286 Lal24g0807 24 6394550 6396654 LSH