Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1069 ATGGCTGCTGTTGCCAATCCAATAGTTGGGTCCCAGGTTTGGGTGGAGGATTCTGATGTAGCTTGGATAGATGGTGAAGTTTTGGAGGTTAATGGAGATAAAATCAAAGTCCTTTGCACTTCAGGCAAGACGGTTGTTGTTAAAGCTTCCAGTGTTTATCACAAAGATACTGAAGCCCCACCATGTGGAGTGGATGATATGACAAAACTTGCTTATTTACATGAACCTGGTGTTCTATATAATCTGAGATCAAGATATGATATCAATGAAATTTATACATACACTGGGAGTATTTTGATTGCTGTGAACCCTTTCATCAGGCTTCCTCATTTATACAATAGCCATATGATGGCACAATATAAAGGAGCAGGTTTTGGTGAGCTAAGTCCACATCCTTTTGCTGTCGCAGATGCTGCATATAGGCTTATGATTAATGAAGGAGTCAGCCAGTCAATATTGGTTAGTGGTGAAAGTGGGGCTGGTAAAACAGAAAGCACCAAGTTACTTATGCAATATCTTGCTTACATGGGAGGTAGAGCTACTGTCGGTGAAGGTAGAACTGTTGAGCAGAAAGTCCTAGAGTCCAATCCCGTTCTAGAAGCCTTTGGCAATGCAAAGACCGTTAGAAACAATAATTCAAGTCGCTTTGGTAAGTTTGTGGAGATCCAGTTTGACCAAAAAGGAAGAATTTCAGGAGCTGCTATCAGAACTTATCTGTTGGAAAGATCACGTGTTTGCCAGTTGTCAGATCCAGAGAGGAATTATCACTGTTTCTATATGCTCTGTGCTGCACCTCCGGAGGATGTTCAAAAGTACAAATTAGGAAACCCAAGAACATTTCATTATTTGAACCAATCAAATTGCTTTGAGTTGGAAGGGCTTGATGAGTCTAAAGAATATCATGATACAAGGAGAGCAATGGACGTTGTTGGAATAAGTTCTGAGGAACAGGAAGCAATATTTCGAGTGGTTGCTGCAATTTTGCACCTTGGCAACATTGAATTTACAAAAGGGATGGAAATGGACTCATCTATGACCAAAGATGAAAAATCTCAATTTCACCTACAGACTGCTGCTGAACTTTTCATGTGTGATGCAAAAGCACTTGAAGATTCTCTTTGCAAACGTGTAATTGTTACTCGTGATGAAACTATTACAAAATGTCTGGATCCAGATGCTGCTGCTCTAAGCCGAGATGCTTTGGCTAAGATTGTGTACACACGGTTGTTTGATTGGCTGGTGGATAAAATTAATAGTTCAATTGGTCAAGACCCTGAGTCAACGTCCTTAATTGGCGTGCTGGATATTTATGGTTTTGAGAGTTTCAATACTAACAGTTTTGAACAATTCTGTATTAATTTGACCAATGAGAAGCTTCAGCAGCACTTTAATCAGCATGTTTTCAAAATGGAGCAAGAAGAATACAAAAAGGAGGAGATTGATTGGAGTTACATTGAATTTGTTGACAATCAAGATATCCTTGATCTCATTGAAAAGAAACCTGGTGGCATTATTGCTCTTCTCGATGAGGCATGTATGTTTCCTAGATCGACACATGAAACTTTTGCCCAAAAGCTGTATCAGACATTCAAAAACCATAAAAGGTTCAGCAAGCCCAAATTGGCACGTAGTGACTTCACAATTTGCCATTATGCTGGTGATGTCACTTATCAAACTGAATTGTTCCTGGACAAGAACAAAGATTACGTTGTTGCAGAACACCAAGCTCTTCTTTATGCTTCCAAATGTCCCTTCGTTTCGGGTTTGTTTCCCCCCTCACCTGAAGAATCGTCCAAACAATCAAAGTTCTCTTCGATAGGTACCCGATTTAAGCAACAGTTGGTATCACTACTTGAAACTCTCAGTGCCACTGAGCCACACTACATTCGTTGTGTAAAACCCAATAACCTTCTGAAGCCAGGAATTTTTGAGAATAAAAATGTTCTACAGCAACTGCGTTGTGGGGGAGTCATGGAGGCAATTAGGATAAGCTGTGCTGGATATCCGACTAGAAAAACCTTTGATGAATTTGTGGATCGGTTTGGGCTTCTTGCATCTGAATCTTTGGTTGGAAGATCTGATGAGGTGGCTTGTAAGAGGCTTCTGGAGAACGTTGAGCTTAAAGGCTATCAGATCGGAAAAACAAAGGTGTTTCTCCGAGCTGGTCAAATGGCAGAACTAGATACACGAAGAAGTGAGATCTTAGGAAAGTCAGCAAGCGTTATTCAGAGGAAATTCCGTTCGTATTTGGCTCAAAGAAGTTTTGTCTTGCTTCGTTTATCTGCTAGACAGATTCAAGCTACATGCAGAGGACATCTTGCTCGAAAAGTTTATGAGGGATTGCGGCGGGAAGCTTCTAGTCTGATGATTCAGAGGTATTTCCGCATGCATATTGCTAGGAAGGCATACACTGAATTGTATAGCTCTGCCATTTCTATTCAGACTGGCATGCGAGGGATGGCCGCTCGCTCTGAACTATGCTTTAGGAGGCAGACAAATGCAGCTATTGTCATTCAGAGCCACTGCCGGAAATACTTGGCACATCATCATTTTAATGACTTAAAGAAGGCGGCAACTACAACACAAAGTTTATGGAGAGGAAAAGTTGCTCGGCGAGAATTACGAATGCTCAAGATGGCTGCAAGAGAAACTGGAGCTCTCCAAGCTGCCAAAAATAAGCTAGAAAAGCAAGTTGAAGACCTTACATTGAGGTTGCAGCTGGAAAAACGCATGAGGGCTGACATGGAAGTACTAAAATCACAAGAAAACCAAAGATTACAGTCTGCTTTGCAAGAGATGCAACTTCAGTTTAAAGAAACTAAGGTACTGTTTCAAAAGGAGTGTGAGGCTGCAAAAAGAGAAGCAGAGAGAGTCCCTGTCATACAGGAAGTTCCTGTTGTTGACAATGCTTTGTTAGAGAAGCTTACTAGTGAAAATGAGAAACTCAAGACCTTGGTGACTTCGCTTGAAAAGAAAATTGATGAAACAGAAAAAAGGTATGAAGAGGCAAGCAAAGCTAGTGAAGAAAGGTTGAAGCAAGCTTTGGATGCTGAAACGAAAATAATCCAGTTGAAGACTGCTATGCAAAGGCTTGAAGAGAAATTCTCAGATATTGAATCTGAAAACCAGGTTCTTCGGCAACAATCTCTGCTTGATTCATCCGTGAAAACAATGTCGCAGCATCTTTCTACACATGTGTCAGAGAAGTTGGAAAATGGCCATCATGCGGCCAAAGAGCAGAAAGCTGTGGAGTTTGTTACACCTGTGAAAAAGTTTGAAACAGAATCTGATAGCAAATTGAGGAGATCCTACATTGAACGTCAGCATGAGAATGTTGATGCACTTGTCAACTGTGTTAATAAAAACATTGGCTTCCATCATGGAAAACCTGTTGCTGCATTTACCATTTATAAATGTCTTCTCCAATGGAAATCATTTGAAGCTGAAAGAACAAGTGTATTTGATCGCCTTATCCAGATGATTGGCTCTGCAATTGAGAATCAAGAAGAAAATGATCTTATGGCCTATTGGCTATCAAATACGTCTGCATTATTGTTTTTGCTTCAACAAAGTCTGAAATCTGGTGGTGCAACTGACGCAACCCCGGTTAGAAAACCACCTAATCCAACATCCCTCTTTGGAAGAATGGCTATGGGTTTTCGTTCATCCCCTTCTTCTGCCAACCTCAGTGCCCCATCATTAGATGTTATACGCAAGGTGGAGGCTAAATACCCTGCTTTGCTCTTCAAGCAGCAGCTCACAGCCTATGTGGAGAAAATATATGGCATCCTTCGGGACAACTTGAAGAAGGAGTTAGCCTCTTTGCTTTCATTGTGTATCCAGGTTTTTGGTTCTGTTCCTCATGCAAGTATTATTGCTGATATACAGGCACCAAGAACATCAAAGGGGGCTCTAAAGTCTAGCCGGTCAATCGGTAAAGATTCTCCCATGGGTCACTGGCAGAGTATAATTGAATACCTCAACACCCTCCTCTGTAATCTGAAAGAGAACTTTGTGCCTACAATCCTCATCCAAAAGATCTTCACTCAAACTTTCTCATATATCAATGTTCAACTCTTCAACAGTCTTCTTCTGCGTCGTGATTGTTGCACATTCAGCAATGGGGAATATGTCAAAGCCGGTTTAGCAGAATTGGAGCTGTGGTGCGCCCAAGCGAAGGAGGAGTATGCAGGGTCATCTTGGGATGAGCTTAAACACATAAGACAGGCTGTTGGCTTCTTGGCATATAATAAGGTGCCTAGAGAGATTTTGTGGAGATCTCTAGAGAAGAAAGACTTACTGTGCATGCTTCTTGGAGATGATATTGTCTTAGTGGGATACCCGAGAAAGGAATTAAACGGGAAGCTAGAAATGTGGAGACAAACTTTAAAAGAACATGAATTTCGTCTAAGCCGAAGTAAGATAAAGTATGTTGGGTGTAAGCTTAGAAAGAGGCAGACAAACCCTACTATAGAGGTTATTCATCAGAAGTATAGGATTTCCTATGATGAAATCATTAATGATTTATGCCCTGTCATGAGTGTCCAGCAGCTGTACAGAATATGTACACTCTACTGGGATGCTAATTACAATACTCGAAGTGTATCCTCAGATGTCCTTTCAAGCATGAGGGTACTTATGGCTGAAGACTCTAATAATGCTCGGAGTGATTCTTTCTTGTTGGATGACAGTTCCAGCATCCCCTTCTCTGTGGATGACCTCTCTACATCACTTCAGGAGAAGGATTTCTCAGAGATGAAACCAGCCGATGAGCTTCTCGGGAATCCCGCCTTCCAATTTTTAAGTGAGTAG 4812 0.4123 MAAVANPIVGSQVWVEDSDVAWIDGEVLEVNGDKIKVLCTSGKTVVVKASSVYHKDTEAPPCGVDDMTKLAYLHEPGVLYNLRSRYDINEIYTYTGSILIAVNPFIRLPHLYNSHMMAQYKGAGFGELSPHPFAVADAAYRLMINEGVSQSILVSGESGAGKTESTKLLMQYLAYMGGRATVGEGRTVEQKVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQKGRISGAAIRTYLLERSRVCQLSDPERNYHCFYMLCAAPPEDVQKYKLGNPRTFHYLNQSNCFELEGLDESKEYHDTRRAMDVVGISSEEQEAIFRVVAAILHLGNIEFTKGMEMDSSMTKDEKSQFHLQTAAELFMCDAKALEDSLCKRVIVTRDETITKCLDPDAAALSRDALAKIVYTRLFDWLVDKINSSIGQDPESTSLIGVLDIYGFESFNTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYKKEEIDWSYIEFVDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKNHKRFSKPKLARSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLYASKCPFVSGLFPPSPEESSKQSKFSSIGTRFKQQLVSLLETLSATEPHYIRCVKPNNLLKPGIFENKNVLQQLRCGGVMEAIRISCAGYPTRKTFDEFVDRFGLLASESLVGRSDEVACKRLLENVELKGYQIGKTKVFLRAGQMAELDTRRSEILGKSASVIQRKFRSYLAQRSFVLLRLSARQIQATCRGHLARKVYEGLRREASSLMIQRYFRMHIARKAYTELYSSAISIQTGMRGMAARSELCFRRQTNAAIVIQSHCRKYLAHHHFNDLKKAATTTQSLWRGKVARRELRMLKMAARETGALQAAKNKLEKQVEDLTLRLQLEKRMRADMEVLKSQENQRLQSALQEMQLQFKETKVLFQKECEAAKREAERVPVIQEVPVVDNALLEKLTSENEKLKTLVTSLEKKIDETEKRYEEASKASEERLKQALDAETKIIQLKTAMQRLEEKFSDIESENQVLRQQSLLDSSVKTMSQHLSTHVSEKLENGHHAAKEQKAVEFVTPVKKFETESDSKLRRSYIERQHENVDALVNCVNKNIGFHHGKPVAAFTIYKCLLQWKSFEAERTSVFDRLIQMIGSAIENQEENDLMAYWLSNTSALLFLLQQSLKSGGATDATPVRKPPNPTSLFGRMAMGFRSSPSSANLSAPSLDVIRKVEAKYPALLFKQQLTAYVEKIYGILRDNLKKELASLLSLCIQVFGSVPHASIIADIQAPRTSKGALKSSRSIGKDSPMGHWQSIIEYLNTLLCNLKENFVPTILIQKIFTQTFSYINVQLFNSLLLRRDCCTFSNGEYVKAGLAELELWCAQAKEEYAGSSWDELKHIRQAVGFLAYNKVPREILWRSLEKKDLLCMLLGDDIVLVGYPRKELNGKLEMWRQTLKEHEFRLSRSKIKYVGCKLRKRQTNPTIEVIHQKYRISYDEIINDLCPVMSVQQLYRICTLYWDANYNTRSVSSDVLSSMRVLMAEDSNNARSDSFLLDDSSSIPFSVDDLSTSLQEKDFSEMKPADELLGNPAFQFLSE 1603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1069 1603 ProSiteProfiles IQ motif profile. 737 764 IPR000048 GO:0005515
Lal13g1069 1603 CDD MYSc_Myo11 76 720 IPR036018 -
Lal13g1069 1603 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Lal13g1069 1603 Gene3D - 440 624 - -
Lal13g1069 1603 Coils Coil 923 943 - -
Lal13g1069 1603 Pfam Myosin head (motor domain) 64 720 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal13g1069 1603 ProSiteProfiles IQ motif profile. 758 787 IPR000048 GO:0005515
Lal13g1069 1603 CDD MyosinXI_CBD 1106 1572 IPR037975 GO:0007015
Lal13g1069 1603 ProSiteProfiles Dilute domain profile. 1155 1549 IPR002710 -
Lal13g1069 1603 Gene3D - 785 832 - -
Lal13g1069 1603 Gene3D - 833 882 - -
Lal13g1069 1603 Gene3D - 735 784 - -
Lal13g1069 1603 SMART iq_5 757 779 IPR000048 GO:0005515
Lal13g1069 1603 SMART iq_5 853 875 IPR000048 GO:0005515
Lal13g1069 1603 SMART iq_5 805 827 IPR000048 GO:0005515
Lal13g1069 1603 SMART iq_5 734 756 IPR000048 GO:0005515
Lal13g1069 1603 SMART iq_5 830 852 IPR000048 GO:0005515
Lal13g1069 1603 SMART iq_5 782 804 IPR000048 GO:0005515
Lal13g1069 1603 PANTHER MYOSIN-14 7 1418 - -
Lal13g1069 1603 PANTHER MYOSIN-14 1492 1601 - -
Lal13g1069 1603 Pfam Myosin N-terminal SH3-like domain 10 52 IPR004009 GO:0003774|GO:0005524|GO:0016459
Lal13g1069 1603 Coils Coil 972 1048 - -
Lal13g1069 1603 ProSiteProfiles IQ motif profile. 806 835 IPR000048 GO:0005515
Lal13g1069 1603 Gene3D - 668 730 - -
Lal13g1069 1603 ProSiteProfiles IQ motif profile. 831 860 IPR000048 GO:0005515
Lal13g1069 1603 Gene3D - 253 311 - -
Lal13g1069 1603 SMART DIL_2 1346 1442 IPR002710 -
Lal13g1069 1603 Coils Coil 1449 1469 - -
Lal13g1069 1603 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal13g1069 1603 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal13g1069 1603 PRINTS Myosin heavy chain signature 197 224 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal13g1069 1603 PRINTS Myosin heavy chain signature 430 458 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal13g1069 1603 PRINTS Myosin heavy chain signature 483 511 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal13g1069 1603 PANTHER MYOSIN 7 1418 - -
Lal13g1069 1603 PANTHER MYOSIN 1492 1601 - -
Lal13g1069 1603 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 787 883 IPR027417 -
Lal13g1069 1603 Pfam DIL domain 1347 1422 IPR002710 -
Lal13g1069 1603 Gene3D Kinesin motor domain 65 663 IPR036961 -
Lal13g1069 1603 Coils Coil 877 911 - -
Lal13g1069 1603 Pfam IQ calmodulin-binding motif 786 803 IPR000048 GO:0005515
Lal13g1069 1603 Pfam IQ calmodulin-binding motif 856 875 IPR000048 GO:0005515
Lal13g1069 1603 Pfam IQ calmodulin-binding motif 737 755 IPR000048 GO:0005515
Lal13g1069 1603 Pfam IQ calmodulin-binding motif 832 851 IPR000048 GO:0005515
Lal13g1069 1603 Pfam IQ calmodulin-binding motif 762 778 IPR000048 GO:0005515
Lal13g1069 1603 ProSiteProfiles IQ motif profile. 854 883 IPR000048 GO:0005515
Lal13g1069 1603 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 34 785 IPR027417 -
Lal13g1069 1603 Gene3D Myosin VI head, motor domain, U50 subdomain 313 602 - -
Lal13g1069 1603 ProSiteProfiles IQ motif profile. 783 812 IPR000048 GO:0005515
Lal13g1069 1603 SMART MYSc_2a 57 733 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal13g1069 1603 ProSiteProfiles Myosin motor domain profile. 62 732 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1069 Lal-Chr13 7966019 7985016 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g1069 1493 1601 Myosins gene family AT5G43900 77.982 2.89e-41 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1069 K10357 - gmx:100791070 2463.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g1069 13 7966019 7985016 Lal13g1069 13 7966019 7985016 ECH
Lal13g1069 13 7966019 7985016 Lal24g0806 24 6369744 6393004 LSH
Lal13g1069 13 7966019 7985016 Lal11g1104 11 14724703 14739239 PCT
Lal13g1069 13 7966019 7985016 Lal1g1868 1 20954802 20967651 PCT