Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1063 ATGAAAATGCCAGCTTCTGTTTTCTTTCTCTTCGCTCTCATTTGCTTCCTTTGCTCAGTCGAGTCGGTTTCTATGAGCATGCCATTTGCTTTATCTGAACGAGCTCAAATGCGGTTAGGTCAGCCTTCTTCTATGTCATCTGTTGCACATGGTCCACCTCCATTTTATCAAGGTCCTAGTGTGACTACAACACCAAAACGTCACCATCATCGTCCCAACATGCAACCTTATGCAATGGCTCCTTCCCTTTCTAAAGGCCAAGCTTGTGACCCAATCTGTACAGATCCACTCACAGCAACTCCGTTTGGTTCACCTTGTGGTTGTGTATTTCCCATGAAAGTCAGACTTATACTGGATATAGCTCCATTGCCTATTTTCCCTGTAATTAATCAATTAGAGATTGAAGTTGCATCTGGGACATACTTGAAGCAGAGCCAAGTGAGGATAATGGGTGTGACTGCTGACAGTGAGAATCAGGGAAGAACGATAGTTGATATTAACTTGGTTCCACTTGGAGAGAAATTTGATGATATCACTTTTTCTGTGATATGTGAGAGGTTTTGGCACAAGAAAGTTCCTTTAAATAAGAGCCTTTTCGGTGATTTTGCAGTCTTGTCCATTACTTATCCAGAGATGCCAGCGTCAGCACCACATGGAACCTTTGCTAGAGATGGTCATCATCCCAATCCTAGGTACGGTGCTGCAGGTCTTATCCCATTCACAGCCAATGTTATCAGCAGCGAGAACCAGAAAATGTGTCCTAGAACCATAATCATCATTGCTTTATCTTCCTTTGTGCTCTTGTTGGTTTTGGTTGGGGCACTCTCTATCTTGTATAAATGGAGGAAAGTTAGGAGACCATCAAGTGCTATTGGCCCTGCAATCGCAACGTCTCTAAACACGAGACCTGCCATGGAGTCTATGTCATCGAGCAGAGTTACAAGCACAAGGTCAATGTCCCTTATGTCCACAATGGCTACTTCTATTCTCTCTGTTAAAAGGTTTTCACTTTCTGAGATTCAGAAAGCAACAGATAAGTTCAGTTCAAAGAGAGTGTTAGGAGAAGGAGGATTTGGACGTGTTTATAGTGGGACATTGGGTGATGGAACTGAAGTTGCAGTTAAGCTGCTAACCATGGATAATCAGAATAGGGACCGTGAATTTCTCACGGAAATTGAGTTGCTACGCAGTTTGCATCATCGCAATCTTGTGAAACTCATTGGTATATGCATGGAAGGGCGCAGACGTTGCTTAGTATACGAGCTTGTTCGCAATGGCAGTGTTGAGTCCCATTTGCATGGTGTTGACAAGAAAAACAGCCCTTTAAGTTGGGGAGCACGGACAAAAATTGCCCTTGGAGCCGCAAGAGGATTGGCCTATCTTCATGAAGATTCTAATCCTCGTGTAATTCACCGGGACTTCAAAGCTAGCAACGTGTTATTGGAAGATGATTTTACCCCCAAGGTTTCTGATTTTGGGTTAGCAAGAGAAGCAACTGAAGGAAATAATCATATTTCTACAAGGGTCATGGGTACTTTTGGGTATGTTGCCCCAGAGTATGCAATGACAGGCCATTTACTAGTTAAAAGTGATGTTTATAGTTACGGTGTTGTGCTCCTTGAACTTCTCACAGGCCGAAAACCAGTGGACATGTCTCAACCTCCGGGACAAGAGAATCTTGTAACATATGCACGTCCACTGTTGACAACTAGAGAAGGTTTAGAGCAACTGGTGGATCCATCTCTGGCTGGAACTTATGAGTTTGATGAAATGGCAAAGCTGGCTTCTATCGCTTCAATGTGTGTACACCAAGAAGTCACTCAGAGACCATTCATGGGTGAAGTTGTGCAGGCTCTGAAGTTGATATACAACGACACAGATGAGAGTCTCGGTAGCAAGGATTCTCCTGAAGAATCTGACTTTGCAGATGACATTTCCCCGTCTGAGAACGGTTGGTGGAACGCTGAAGGGGAAATCCCAAGATTAGCATATGGACAAGCATCTTCATTCATGACAATGGAGTACAGTTCTGGTCGACTTGAAGAAATCGGAAACAAACTGTTCTCAGCTTCAAGCTTGATCAGTGACGATATATTCTTACCAATTAAGTACGCAAATCGATCAGGTCCCTTGAAAACAACCCGAAGCAAGATATCCATGTATAAACTTGAAGGAAGTTGGAGTGTACATGGGGTACTTCCTTCCAAGCATGTTTGGAATGATGGTTAA 2229 0.4334 MKMPASVFFLFALICFLCSVESVSMSMPFALSERAQMRLGQPSSMSSVAHGPPPFYQGPSVTTTPKRHHHRPNMQPYAMAPSLSKGQACDPICTDPLTATPFGSPCGCVFPMKVRLILDIAPLPIFPVINQLEIEVASGTYLKQSQVRIMGVTADSENQGRTIVDINLVPLGEKFDDITFSVICERFWHKKVPLNKSLFGDFAVLSITYPEMPASAPHGTFARDGHHPNPRYGAAGLIPFTANVISSENQKMCPRTIIIIALSSFVLLLVLVGALSILYKWRKVRRPSSAIGPAIATSLNTRPAMESMSSSRVTSTRSMSLMSTMATSILSVKRFSLSEIQKATDKFSSKRVLGEGGFGRVYSGTLGDGTEVAVKLLTMDNQNRDREFLTEIELLRSLHHRNLVKLIGICMEGRRRCLVYELVRNGSVESHLHGVDKKNSPLSWGARTKIALGAARGLAYLHEDSNPRVIHRDFKASNVLLEDDFTPKVSDFGLAREATEGNNHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPPGQENLVTYARPLLTTREGLEQLVDPSLAGTYEFDEMAKLASIASMCVHQEVTQRPFMGEVVQALKLIYNDTDESLGSKDSPEESDFADDISPSENGWWNAEGEIPRLAYGQASSFMTMEYSSGRLEEIGNKLFSASSLISDDIFLPIKYANRSGPLKTTRSKISMYKLEGSWSVHGVLPSKHVWNDG 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1063 742 ProSitePatterns Serine/Threonine protein kinases active-site signature. 469 481 IPR008271 GO:0004672|GO:0006468
Lal13g1063 742 ProSitePatterns Protein kinases ATP-binding region signature. 353 375 IPR017441 GO:0005524
Lal13g1063 742 SUPERFAMILY Protein kinase-like (PK-like) 331 627 IPR011009 -
Lal13g1063 742 Gene3D Transferase(Phosphotransferase) domain 1 423 644 - -
Lal13g1063 742 Gene3D Phosphorylase Kinase; domain 1 318 422 - -
Lal13g1063 742 PANTHER OS01G0750732 PROTEIN 7 740 - -
Lal13g1063 742 Pfam Protein tyrosine and serine/threonine kinase 349 619 IPR001245 GO:0004672|GO:0006468
Lal13g1063 742 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 7 740 - -
Lal13g1063 742 CDD STKc_IRAK 353 622 - -
Lal13g1063 742 ProSiteProfiles Protein kinase domain profile. 347 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1063 Lal-Chr13 7887133 7900693 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g1063 92 644 Receptor kinase-like Gene Family AT5G56890 56.085 0.0 592
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Lal13g1063 PK_Tyr_Ser-Thr 2.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1063 - - gmx:100792309 1016.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g1063 13 7887133 7900693 Lal13g1063 13 7887133 7900693 ECH
Lal11g1103 11 14714179 14719895 Lal13g1063 13 7887133 7900693 PCT
Lal1g1869 1 20975844 20981618 Lal13g1063 13 7887133 7900693 PCT
Lal13g1063 13 7887133 7900693 Lal11g1103 11 14714179 14719895 PCT
Lal13g1063 13 7887133 7900693 Lal1g1869 1 20975844 20981618 PCT