Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1057 ATGAGACGGCGCGGCGTTCTCCCTGATCGTGACAAGAATTCATCAAAGAATCATAATTCTCGTCTTTTTTGTTTAGCATCTTTATCTGCATTCTTTTGGTTTTTGTTTTTATACTTCCATTTTGTTGTTCTTGCTCATAATAATAATAATAATAATAATAATAATGATAATAATAATTATGATATTGTTCAATCAACTAAATTAGCCCCATCTCTTCCCTTTAATCATGAATCCACCCCTTCCCATGTTACCGTACCCAATGATCCCCAAACCCATTCTAGAAAGTTTGGTTTCCCAAAGAGTAATCATGATCGTGATCACAATTGCAGTCGCAATCACGATCATGATACTCGCATTCGAGAGAAGAAGAATTTCCCTTTTGAGAGAGCATTGAGAACTAGTGATAACAAGAGTGATCCATGTGGTGGGAGGTATATTTATGTTCACGACCTTCCTTCGAGGTTTAATGAGGATATGTTGAAGGAGTGCAAGAGTTTGAGTCTTTGGACCAATATGTGTAAGTTCACTTCCAATGCTGGACTTGGTCCGCCATTGGAGAATGTTGAAGGCGTGTTCTCGGATGAAGGATGGTATGCTACAAATCAATTTGCTGTTGATGTGATATTCAGCAACCGGATGAAGCAGTATGAATGTTTGACGCAGGATTCGTCTATTGCTGCTGCAATTTTCGTGCCCTTTTATGCTGGGTTTGACATTGCACGGTATCTTTGGGGTTATAATATTTCGATGAGGGATGCGGCTTCGCTTGAGCTGGTTAATTGGCTTATGAAGAGACCAGAGTGGAATATAATGAATGGGAAAGATCACTTTCTTGTTGCTGGAAGGATAACTTGGGATTTCAGGAGATTATCCGAGGAAGAATCGGACTGGGGGAATAAGCTTCTGTTTTTACCTGCAGCGAAGAATATGTCCATGCTCGTGGTTGAGTCGAGCCCCTGGAATGGAAATGATTTTGGGATTCCATATCCTACATACTTTCACCCTGCAAAAGATGCAGACGTGTTCAAATGGCAGGATAGAATGCGACGACTAGACCGGAAGTGGCTTTTCTCCTTTGCTGGAGCTCCCCGTCCTGGAAATCCGAAATCAATCCGGGGGCAGTTAATTGATCAATGTAGAAGTTCACGGGTTGGTAAGCTGTTGGAATGTGACTTCGGCGAAAGCAAATGTCATTCTCCCAGCAGCATAATGCAGATGTTTCAGAGCTCACTTTTCTGCCTGCAGCCCCAGGGTGATTCGTACACTCGAAGGTCGGCTTTTGATTCAATGTTGGCTGGTTGTATACCTGTGTTCTTCCATCCAGGTTCAGCTTATACACAATATACTTGGCATCTTCCTAAGTCTTATACAAAGTATTCTGTTTTCATTCCCGAGGACGATATTCGTAAGAGGAATGTTAGCATAGAGGAAAGGCTTAGTCAGATACCTCCTGAGCAAGTGAAAATCATGAGAGAAGAGGTCATTAGTCTCATTCCAAGACTAGTATATGCTGATCCTCGCTCTAAATTAGAAACTCTTAAAGATGCATTTGATGTTTCTGTGCAAGCAATAATCGAGAAGGTTACAAATTTGAGGAAGGATATTATCGAAGGCCATACCGATAAAAACTTCATCGAGGAGAACAGTTGGAAATATGCTTTGTTGGATGAGGGAAAGCATGAGGTAGGACCTCATGAATGGGATCCTTTCTTCTCAAAACCGAAGTAG 1728 0.4144 MRRRGVLPDRDKNSSKNHNSRLFCLASLSAFFWFLFLYFHFVVLAHNNNNNNNNNDNNNYDIVQSTKLAPSLPFNHESTPSHVTVPNDPQTHSRKFGFPKSNHDRDHNCSRNHDHDTRIREKKNFPFERALRTSDNKSDPCGGRYIYVHDLPSRFNEDMLKECKSLSLWTNMCKFTSNAGLGPPLENVEGVFSDEGWYATNQFAVDVIFSNRMKQYECLTQDSSIAAAIFVPFYAGFDIARYLWGYNISMRDAASLELVNWLMKRPEWNIMNGKDHFLVAGRITWDFRRLSEEESDWGNKLLFLPAAKNMSMLVVESSPWNGNDFGIPYPTYFHPAKDADVFKWQDRMRRLDRKWLFSFAGAPRPGNPKSIRGQLIDQCRSSRVGKLLECDFGESKCHSPSSIMQMFQSSLFCLQPQGDSYTRRSAFDSMLAGCIPVFFHPGSAYTQYTWHLPKSYTKYSVFIPEDDIRKRNVSIEERLSQIPPEQVKIMREEVISLIPRLVYADPRSKLETLKDAFDVSVQAIIEKVTNLRKDIIEGHTDKNFIEENSWKYALLDEGKHEVGPHEWDPFFSKPK 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1057 575 PANTHER BNAA09G10260D PROTEIN 14 548 - -
Lal13g1057 575 Pfam Exostosin family 141 478 IPR040911 -
Lal13g1057 575 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 14 548 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1057 Lal-Chr13 7820251 7821978 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1057 K20888 - gmx:100780467 920.228
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g1057 13 7820251 7821978 Lal13g1057 13 7820251 7821978 ECH
Lal13g1057 13 7820251 7821978 Lal24g0803 24 6321949 6323976 LSH
Lal11g1090 11 14580756 14583614 Lal13g1057 13 7820251 7821978 PCT
Lal20g0037 20 240419 243147 Lal13g1057 13 7820251 7821978 PCT
Lal13g1057 13 7820251 7821978 Lal11g1090 11 14580756 14583614 PCT
Lal13g1057 13 7820251 7821978 Lal20g0037 20 240419 243147 PCT