Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1020 ATGGGAAAAGAACAAATTGAGGTGCTGAATGCACTAGATGTGGCCAAAACACAATGGTACCATTTCACAGCCATCATCGTTGCTGGAATGGGTTTCTTCACTGATGCTTATGATCTATTCTGTATATCTCTTGTGACAAAGCTACTTGGTCGCATATATTACCACCAAAATGGTGCAGAAAAGCCTGGGTCATTGCCTCCAAGTGTGGCAGCTGCTGTTAATGGTGTAGCTTTTGTTGGAACACTTTCTGGGCAACTCTTCTTTGGCTGGCTAGGTGACAAGATGGGCCGTAAAAAGGTCTATGGTATGACACTGATGCTAATGGTTTTATGCTCAATTGCTTCTGGTCTTTCTTTCAGCCACGACCCGAAAACTGTAATGATAACTCTTTGCTTTTTTCGATTCTGGCTTGGTTTTGGCATTGGTGGAGACTACCCTCTTTCTGCTACCATCATGTCCGAGTATGCTAATAAGAAAACTCGTGGTGCCTTTATAGCTGCTGTCTTTGCCATGCAAGGGTTTGGAATTTTGGCAGGTGGTGTATTTGCAATCATAATATCATCAACATTCAAGACCAAGTTTTCTGCTCCATCATATGAGATTGATCCATTGGGTTCAACGGTTCCACAAGCAGACTATGTTTGGAGGATAATTCTAATGTTTGGGGCAATTCCAGCTGCAATGACTTTCTACTCAAGGTCGAAAATGCCAGAAACTGCACGTTATACTGCCCTAGTTGCTAAGAATACTGAACAGGCTGCAAAAGATATGGCTAGGGTTATGCAAATGGAGATTGGAGTGGAAGTACAGAAAGAATCTGAGATACAACAGACTAAGCAATATGGCATGTTCTCCAAGGAATTCTTCAGTCGCCATGGACTTCATTTACTTGGAACATGCAGCACATGGTTCTTGCTTGATATTGCATTTTACAGTCAAAATCTCTTCCAAAAGGATATATTCACCGCAATTGGTTGGATTCCTGCTGCAAAATCAATGAATGCACTTGAAGAGGTTTACAAAATTGCAAGGGCTCAAACACTTATTGCTCTTTGTAGTACAGTTCCTGGATACTGGTTTACAGTGGCTCTCATTGACAGGATAGGAAGATTTTCTATCCAATTGATGGGGTTCTTCTTTATGACTGTGTTTATGTTCGGTCTTGCCATTCCTTATGACCACTGGACTCATAAGGAAAACCGAATAGGGTTCGTGGTGATGTATTCTTTGACCTTCTTCTTTGCAAACTTTGGGCCTAATGCTACCACATTTGTTGTGCCAGCAGAAATTTTCCCAGCTAGATTCCGATCTACTTGTCATGGAATATCTTCAGCATCTGGGAAGCTTGGAGCAATGGTTGGTGCATTTGGGTTCTTGTATTTGGCACAGAGCCAAGACAAAAGCAAAGTAGAAGCAGGATACAGTGCAGGTATTGGTGTGAAGAATTCACTAATTTTGTTAGGTGTTGTTAACATTTTAGGGTTCCTTTTCACATTCTTGGTGCCTGAGTCAAATGGAAGATCTTTGGAGGAAATATCAGGTGAGAATGAAGAGGAATAA 1560 0.4147 MGKEQIEVLNALDVAKTQWYHFTAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHQNGAEKPGSLPPSVAAAVNGVAFVGTLSGQLFFGWLGDKMGRKKVYGMTLMLMVLCSIASGLSFSHDPKTVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGVFAIIISSTFKTKFSAPSYEIDPLGSTVPQADYVWRIILMFGAIPAAMTFYSRSKMPETARYTALVAKNTEQAAKDMARVMQMEIGVEVQKESEIQQTKQYGMFSKEFFSRHGLHLLGTCSTWFLLDIAFYSQNLFQKDIFTAIGWIPAAKSMNALEEVYKIARAQTLIALCSTVPGYWFTVALIDRIGRFSIQLMGFFFMTVFMFGLAIPYDHWTHKENRIGFVVMYSLTFFFANFGPNATTFVVPAEIFPARFRSTCHGISSASGKLGAMVGAFGFLYLAQSQDKSKVEAGYSAGIGVKNSLILLGVVNILGFLFTFLVPESNGRSLEEISGENEEE 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1020 519 Gene3D MFS general substrate transporter like domains 20 519 IPR036259 -
Lal13g1020 519 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 1 519 - -
Lal13g1020 519 CDD MFS_PhT 25 504 - -
Lal13g1020 519 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-7-RELATED 1 519 - -
Lal13g1020 519 TIGRFAM 2A0109: phosphate:H+ symporter 11 515 IPR004738 GO:0005315|GO:0006817|GO:0016021
Lal13g1020 519 Pfam Sugar (and other) transporter 26 513 IPR005828 GO:0016021|GO:0022857|GO:0055085
Lal13g1020 519 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 506 IPR020846 GO:0022857
Lal13g1020 519 SUPERFAMILY MFS general substrate transporter 11 513 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1020 Lal-Chr13 7527987 7529546 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g1020 1 514 Inorganic Solute Cotransporters AT2G38940 83.333 0.0 906
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1020 K08176 - gmx:100786638 893.264
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g1020 13 7527987 7529546 Lal13g1020 13 7527987 7529546 ECH
Lal13g1020 13 7527987 7529546 Lal24g0780 24 6064310 6065926 LSH
Lal13g1020 13 7527987 7529546 Lal1g1887 1 21143078 21144700 PCT
Lal13g1020 13 7527987 7529546 Lal20g0024 20 186343 187947 PCT