Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1013 ATGTTTAGCAGACCAAGAGATTCAAGTGCTTTCAGTATTTTCAAATGGAAACGTCAAGATGAATCATCAGTGACGACACATTTACTTCAGGATGTTCTGCCCGAGATTGAGTTGTCTGATTATAGAAGGATCCCAAGTCCAGGTAGTGAGAGCCCTTCAGGGCTTCTTAACGGTGAAAGCCTAAATGCAGAACCGATTCCTGACTTGGATCTATTCTTTGAAAGGCTTTACAGCTACTACTGTGAGAAAGGACTTTGGTGCATCATTATAAAGTGGATTGTTGAACTTTTGAGTCTAGGGTTCACAATATGTTTTTCAGGATTCTTTTTACTGTATGTTGATTGGAATGGCCTTCGTAATGCAAAGTGTGGGATAAATGCAGTTGAGTCTGGAATCAAGCCCTGTGATCTTGCTAAAGAAGCTCTTCATCAATACCCATTGACCCCGTTAACACTTAACAAAGCTATTATTGTTGGATACCTAGGAATATTTTCCATCTATTGGATATTTTGCTTCTTCAGGTTCTTTGCTCAACTAAAGTATACTCTGGAAATCCGACAGTTTTACTACAATAGTCTCCATGTTACCGACAATGAAATTCAAACCATGGCCTGGGCTACAGTTATTGAAAAAGTTGTTCGGGTGCAAAGCTCACAACAACTATGTGTGGTAAAGGATCTTTCTGCTCATGACATGGTGATGCGGTTGATGCGGAAGGAGAACTACTTAATTGGAATGATCAACAAGGGTGTGCTTGCTTTCCCCATTTCTCAGTGGGTCCCAGGTTCTGGTCCTACAGTGAAGTCTGGTCCTAATGGAACACAATATCGCCTAATACTAACCAAGACCCTTGAGTGGACTTTGAATTGGTGCATCCTGCAAAGCATGTTTGATCGAAACTTTTGTGTCAGAAGGGATTTTGTATCAAATCCAAGGACATTAAAGAAAAGACTTATGATAGTTGGGCTTGCTATGCTTTTACTTTCTCCATTTCTTGTCATATTCATGCTCGTATATCTCTTTCTGACGCATGCTGAACAGTTTTATAACCACCCAAGCACAGCATCATCTCGAAGATGGTCAAATTTGTCAAAGTGGATCTTTAGGGAGTTCAACGAGGTGGACCATCTCTTCAAACATCGGATTAATAACAGTGTATTATGTGCTTCTGATTATCTCAAGCAATTTCCCTCACCTATCATATCAATCATTGCAAAATTCATCTCCTTTGTATCGGGTGGGTTTGCTGCAGTTCTGATCATCATTGCTTTTCTTGAGGAGTCTCTGCTAGAGGGTCATATATTTGGTCGGAACTTGTTGTGGTATGCTGCTGTTTTTGGAACTATAACCGCGATTAGCCGGGCTGCGATCAAAGATGAACTTCTGGTGTTAGACCCTGAAGGAGCAATGTCTATGGTAGTTCAGCATACACATTATATGCCGAAGAGATGGCGTGGCAAAGAAAATACTGAAAATGTTCGAATTGAATTTGAAACCTTATTTCAGTACACAGGGATGATGTTACTTGAGGAAATGGCATCAATTTTCCTCACTCCATACTTACTTCTGTTCGTTGTCCCAAAGCGGGTTGATGATATCTTGCAGTTCATTGCAGATTTTACTGTGAATGTTGAAGGTGTAGGTCATGTTTGCAGCTTTAGCAGCTTTGATTTTCAAGAGCATGGAAACAGTGATTATGGTTCCCCATTCAATGCTCCTTACAACCGAAGGAGTTCCCAGGGGAAGTTAGAGAAATCGTTTTTGAGCTTTCAGAGTAATTATCCTACATGGCAGTCAAATGCACGGGCGAAGCAATTCTTGCTAAATCTGAGAACCTTCAGAGAGCAAAAGTTATCAGGATATGTAAACAGATATACATATTCCCCACATAGAATGTGGAGAGGTAGTTCCAACATGGGAAACAACGGAGACAGAAACAGGTTTACATCTAGGGAAATGCCACTTGATTCTTTTGAAACATGCAATGACTTGGATTCATTGTGGCTAATTGAAGCCAATCAAAACAATCATCCCTATCTTCTTGATTGGTATTATACCTCCCGACCTCATGATTCGACTTTCAGAGAGGTTCCAATTCCAAATGACCCATTTGATGTTACTGAGCATTATCCCAGAGATTGGATGCCCTCAAACTTGACAAAGAACGAACCTGGCTATGCTGAATACTTAAACGAGTATCGCGATGATCGAGCTGCTTCTCATCTTGGGGCTTCCACATCAGCTCCCATCTTCAGGGAAAGCCTTATGGAGGATCATAATTCCAATGATCTGCCCCACACTATCAAGAGCCATTGGTGGGCTAGAAGTCACCACCAGCCGGGCGTGCCGGGTCAGACAAGCTTCTTTGAGCCTCCAGATTTCAATCATCAGCAAACAACAGCATATAATAATTATTATGATAAATTTTCTGATAGAGATTCTGATAGAGGGTCAGAGGGTCAACATGATCAAGAACAACAGTTGTACCGGATAGATCGGCATAATTTATCTAGAACAGCATACACAGATGACTTAGAAGCAGGAGAAATCAATCTTCACTTCGATGATATTTATAGCAGCAGACCTCCAGAAAATCCCACTGTATATTGA 2610 0.4096 MFSRPRDSSAFSIFKWKRQDESSVTTHLLQDVLPEIELSDYRRIPSPGSESPSGLLNGESLNAEPIPDLDLFFERLYSYYCEKGLWCIIIKWIVELLSLGFTICFSGFFLLYVDWNGLRNAKCGINAVESGIKPCDLAKEALHQYPLTPLTLNKAIIVGYLGIFSIYWIFCFFRFFAQLKYTLEIRQFYYNSLHVTDNEIQTMAWATVIEKVVRVQSSQQLCVVKDLSAHDMVMRLMRKENYLIGMINKGVLAFPISQWVPGSGPTVKSGPNGTQYRLILTKTLEWTLNWCILQSMFDRNFCVRRDFVSNPRTLKKRLMIVGLAMLLLSPFLVIFMLVYLFLTHAEQFYNHPSTASSRRWSNLSKWIFREFNEVDHLFKHRINNSVLCASDYLKQFPSPIISIIAKFISFVSGGFAAVLIIIAFLEESLLEGHIFGRNLLWYAAVFGTITAISRAAIKDELLVLDPEGAMSMVVQHTHYMPKRWRGKENTENVRIEFETLFQYTGMMLLEEMASIFLTPYLLLFVVPKRVDDILQFIADFTVNVEGVGHVCSFSSFDFQEHGNSDYGSPFNAPYNRRSSQGKLEKSFLSFQSNYPTWQSNARAKQFLLNLRTFREQKLSGYVNRYTYSPHRMWRGSSNMGNNGDRNRFTSREMPLDSFETCNDLDSLWLIEANQNNHPYLLDWYYTSRPHDSTFREVPIPNDPFDVTEHYPRDWMPSNLTKNEPGYAEYLNEYRDDRAASHLGASTSAPIFRESLMEDHNSNDLPHTIKSHWWARSHHQPGVPGQTSFFEPPDFNHQQTTAYNNYYDKFSDRDSDRGSEGQHDQEQQLYRIDRHNLSRTAYTDDLEAGEINLHFDDIYSSRPPENPTVY 869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1013 869 Pfam Autophagy protein ATG9 64 557 IPR007241 GO:0006914
Lal13g1013 869 PANTHER AUTOPHAGY-RELATED PROTEIN 9 1 867 - -
Lal13g1013 869 PANTHER APG9 AUTOPHAGY 9 1 867 IPR007241 GO:0006914
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1013 Lal-Chr13 7457269 7464087 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1013 K17907 - gmx:100779344 1397.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g1013 13 7457269 7464087 Lal13g1013 13 7457269 7464087 ECH
Lal12g0829 12 6688090 6695037 Lal13g1013 13 7457269 7464087 LSH