Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0978 ATGGCTGAAGAATGTGTTGGAAACTCGGTTGCAACATCTTCTAATACCCCATTAAATTGGTGGTATCTCCAGGCAAATTCTGTTCCTTCCTGGAACAATACTAATAACACATGGAACAACCAAACAAACCCTAATTCTTCTTCTTCTTCTTATGAGGAGAATATATCTGTTTCTACTTCTTTCACTAATGTCTCCAACCATTCAAGCCTCACCGTTGAGTCCTCTCGCAGGCTCGCCGAACCACTTGCACCTTCCTCCAATGAGTTGATGGGAGAACATGCTTCAGACATTCAACTTTGGAGTCATGTTCTATTAGGTGTTGGATCAAATGGCGAGTTACACAACAATCAAGAAATTGGAGAGAACTTTCTGGATGCACTATCATCTAAAAGCATGACAAACACCATGTTTGAACCAGCCTGTGACTACTTGAAGAAACTTGATACAAATTGGGATCACTATAGTGACTCAAATTCATTCAACACTTTAGAGAAGCATATAAATGGGTACAGTAATGCCATGATTGAGAATAATGAAAGGTTGACCAAGTTATCTAATCTTGTAAGCACTTGGTCTATTGCCCCACCAGACCCAGAAGTTAGTAGTCACTTTGTTCCACAAATAAGAAACATGTCTTTGAATTCTTCCATGGATTATTACACACAATCTGACCCTAATTGTCATTTCAAGCAACCTTCTGGAGTGTTCCCTTGCTTTGATCAGGATATGAAGGCTAAGGAAGAATATCATACAAGTGAAGTGGCTGGAGCTTTTTTTGGGAAATCAATGGGAGAGACTAGAAAATTATATCATGATTTACCGAACCTTTCTTCATGCCCAAGAAATTTCTCAGATCTAATATCGTTCAACAATAGGGTAGGAAGGCCAGATATCGGGATTCATGCACAGAAACATAGCATCAAGTACTCAAATTTACCTGAATCAAAGAAGCAAGGTCTTCAGACATCATCAAAGATAAGAATTAATAATGGAAAAGGAGAAGGCACAGCACATGAAGTAAAGAAGAAAAGATCCGAAGAATCTTCAGAAGTAATATTGAAGAAGCTTAAGCAAGACACATCCATAGCTTCATCTACAAAGGTTCAGGTACCCAAAGTCAAGCTAGCAGACAAGATCACAGCCCTTCAGCAAATTGTGTCTCCATTTGGAAAGACTGATACAGCATCAGTGCTGTTTGAAGCAATTGGATACATAAAGTGTCTTCAGGAACAAGTCCAGGTGGGTACCAATATAGAAAAGTCCCTCTCTCATTAG 1275 0.3914 MAEECVGNSVATSSNTPLNWWYLQANSVPSWNNTNNTWNNQTNPNSSSSSYEENISVSTSFTNVSNHSSLTVESSRRLAEPLAPSSNELMGEHASDIQLWSHVLLGVGSNGELHNNQEIGENFLDALSSKSMTNTMFEPACDYLKKLDTNWDHYSDSNSFNTLEKHINGYSNAMIENNERLTKLSNLVSTWSIAPPDPEVSSHFVPQIRNMSLNSSMDYYTQSDPNCHFKQPSGVFPCFDQDMKAKEEYHTSEVAGAFFGKSMGETRKLYHDLPNLSSCPRNFSDLISFNNRVGRPDIGIHAQKHSIKYSNLPESKKQGLQTSSKIRINNGKGEGTAHEVKKKRSEESSEVILKKLKQDTSIASSTKVQVPKVKLADKITALQQIVSPFGKTDTASVLFEAIGYIKCLQEQVQVGTNIEKSLSH 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0978 424 CDD bHLH_AtbHLH_like 369 414 IPR045239 -
Lal13g0978 424 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 359 408 IPR011598 GO:0046983
Lal13g0978 424 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 374 414 IPR036638 GO:0046983
Lal13g0978 424 MobiDBLite consensus disorder prediction 33 52 - -
Lal13g0978 424 PANTHER TRANSCRIPTION FACTOR BHLH111 32 415 - -
Lal13g0978 424 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 32 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0978 Lal-Chr13 7105192 7112498 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0978 1 391 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G31050 31.477 2.89e-20 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0978 - - aprc:113873522 561.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0822 12 6576593 6581272 Lal13g0978 13 7105192 7112498 LSH