Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0976 ATGGCGAGGATCAAACCTCAGGCTCTGCTGCAGCAAAGCAAAAGGAAGAAGGGGCCTTCACGCATAAGTGCCACGACTATTATATTCTACTCATTGATTCTTGTCTTGTTTGCATTCTTTGTGTTCGCTACATATAGACATTGGTCCAACAGGTCAAGATTTCGATCAGAGAATCAATTATCAGTCTCAGTGGCTGAGAATACTTTTGTAGACCCAAGGAAATCTGACCTACCTGGATATGCTGTTTTAAATACCTCCAAGGGCTCTATTATCATAGAACTGCACAAGGAAAGTGCCCCTGAAGTTGTTGATGAATTCATTGAGTTATGTCAAAAAGGGCACTTCAAGGGGATGCTTTTTCACCGTGTGATTAAGCACTTCGTGATTCAGGCAGGGGATAATGAAGGAGTGGGAGCTACGGAAGATTGGAACTTGAGAGGAAAGCAACATACAAGTATGAAACATGAAGCATTCATGCTTGGAACTTCCAAGGGCAAACACTTAAACAAAGGATTCGATCTTTTCATTACAACTGCACCGATACCAGAACTAAATGAGAAGCTTATTGTGTTTGGGCAAGTCATCAAAGGAGAGGATATTGTTCAGGAAATTGAAGAAGTGGATACAGATGAGCACTACAAACCTAAAATTTCTATTGGGATACTTGATGTGTCGCTTACACAAAAGATATGA 693 0.4084 MARIKPQALLQQSKRKKGPSRISATTIIFYSLILVLFAFFVFATYRHWSNRSRFRSENQLSVSVAENTFVDPRKSDLPGYAVLNTSKGSIIIELHKESAPEVVDEFIELCQKGHFKGMLFHRVIKHFVIQAGDNEGVGATEDWNLRGKQHTSMKHEAFMLGTSKGKHLNKGFDLFITTAPIPELNEKLIVFGQVIKGEDIVQEIEEVDTDEHYKPKISIGILDVSLTQKI 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0976 230 SUPERFAMILY Cyclophilin-like 75 226 IPR029000 -
Lal13g0976 230 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 82 224 IPR002130 GO:0000413|GO:0003755
Lal13g0976 230 Gene3D - 67 230 IPR029000 -
Lal13g0976 230 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP21-4 1 230 - -
Lal13g0976 230 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 77 226 IPR002130 GO:0000413|GO:0003755
Lal13g0976 230 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 94 109 IPR002130 GO:0000413|GO:0003755
Lal13g0976 230 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 120 132 IPR002130 GO:0000413|GO:0003755
Lal13g0976 230 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 173 185 IPR002130 GO:0000413|GO:0003755
Lal13g0976 230 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 186 201 IPR002130 GO:0000413|GO:0003755
Lal13g0976 230 CDD cyclophilin 82 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0976 Lal-Chr13 7082738 7087661 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0976 71 226 U-box Gene Family AT5G67530 32.099 6.86e-20 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0976 - - gmx:100803596 397.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0976 13 7082738 7087661 Lal24g0754 24 5671288 5677874 LSH