Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0973 ATGATGGCCCATGAGCAAGAAACTAATATTGCACCAAATAATCATGCCATCATGAACCGGACCGGTTCGGTTCATGGTGAACCACATGGTTCTAACACCAACAAGGTTAAACCCAGTTTGGATAACAATGTCATTCCTGTACATCAGAATCAGCCTCAACCAACAGCAACACCTGCAAGATTATCTATTCTTCACCAGTCCTTGCGTCCAGTTACCCTTAAATTTGAAGATGTTTCTTACAGCATAAGCTTACAAAGCCAGAAGAACAAAGGTTGTATAACAAGGCAAGAGCCAAATCCAAAGAAGAAAGTACTAACTGGTGTAACCGGCATAGCCCTTCCCGGCGAGTTAACGGCAATGTTAGGGCCCTCAGGCAGCGGCAAGACCACCCTTCTCACCGCCCTAGCTGGCCGCCTCGCCGGAAAAATCACCGGCACTATAACATACAATGGAAACCCTAACTCCAATTCCGTGAAGCGCAAGATAGGGTTTGTGTCACAAGATGATGTTCAATACCCTCACCTTACCGTCCTTGAAACACTTACCTATGCTGCTTTGTTGAGGCTACCAAAGACTCTTACCAGGGAAGAGAAGATGCAACATGTGGACATGATCATCACGGAGCTTGGTCTCACGCGCTGCCGTAGCAGCCCAGTTGGTGGCAGCATGGCCTTGTTTCGGGGAATTTCCGGTGGAGAGAGGAAGCGGGTCAGTATCGGGCAGGAGATGTTGGTGAACCCGAGTTTGTTGTTTCTGGATGAGCCCACATCCGGGTTGGACTCAACCACGGCCCAACGGATTGGTTCGCTGCTCCGAGGACTTGCTCGTGGCGGCCGGACAGTGGTGACCACCATTCATCAGCCTTCAAGCCGGTTGTATAGAATGTTTGATAAGGTGGTTGTGTTGTCTGATGGGTACCCGATTTATAGCGGGTCGTCGGGTCGGGTCATGGATTATCTTGAGTCCATTGGGTATGTGCCAGCTTTCAATTTCATGAACCCCGCAGATTTTTTGCTTGACCTTGCTAATGGCATAGTTGCAGATGTCAAACATTATGATCAAATAGACAACCATGATGATCAAGCTTCAATAAAACAGTCCCTAATTTCATCCTATAAGAAAAACTTATATCCTATTCTGAAAGAAGAGATTCAGAGAAATAACAATGACTCAGCGTCTCTTACATCAGGGACACCAAGAAGTTCTGATAATCAATGGAGCACTAGTTGGTGGGAGCAATTCAAGGTGTTGCTTAAGAGGGGTTTAAAGGAGAAGAGGCATGAATCTTTTTCTGGCTTAAAGATTTTTCAAGTCTTGTCTGTCTCCATTCTCTCTGGACTTCTGTGGTGGCACTCAGATCCCTCACATGTACAAGATCAGATTGGACTGCTATTCTTCTTCTCCATATTCTGGGGATTCTTCCCTCTATTCAATGCCATCTTTGTATTTCCTCTAGAGAGGCCAATGCTGAAAAAAGAAAAATCATCAGGAATGTACCATCTTTCCTCGTACTATGTTGCGCGGACGATCGGCGACTTACCAATGGAACTTGTGCTTCCTACAATCTTTGTAACAATAACCTATTGGATGGGTGGTCTAAAACCTTCACTTGTTACATTTGTGTTAACCCTTTTGATCATGCTTTTCAATGTACTAGTCTCTCAAGGAATTGGCCTAGCAATAGGTGCAATTCTCATGGATGTGAAGCAGGCCACAACTCTAGCCTCAGTAACCATGCTAGTGTTTCTATTAGCTGGTGGTTACTACAATCAACACATGCCATCTTTTATAGCATGGTTGAAGTACATTTCTTTTAGTCACTATTGCTATAAGTTAATGGTAGGAGTTCAGTATTCAGTGAATGAGGTTTATGAGTGTGAACCAGGGTTGCATTGTAGGATAAGAGATTTTCCTTCCATAAAGTGCTTGGACCTTGATAATATGTGGAAAGATGTTGCAGCATTGACTGCAATGTTGGTTGGGTACAGAGTTGTGGCATATCTAGCCTTGAAGATTAGGAAACTGCATTGA 2031 0.4446 MMAHEQETNIAPNNHAIMNRTGSVHGEPHGSNTNKVKPSLDNNVIPVHQNQPQPTATPARLSILHQSLRPVTLKFEDVSYSISLQSQKNKGCITRQEPNPKKKVLTGVTGIALPGELTAMLGPSGSGKTTLLTALAGRLAGKITGTITYNGNPNSNSVKRKIGFVSQDDVQYPHLTVLETLTYAALLRLPKTLTREEKMQHVDMIITELGLTRCRSSPVGGSMALFRGISGGERKRVSIGQEMLVNPSLLFLDEPTSGLDSTTAQRIGSLLRGLARGGRTVVTTIHQPSSRLYRMFDKVVVLSDGYPIYSGSSGRVMDYLESIGYVPAFNFMNPADFLLDLANGIVADVKHYDQIDNHDDQASIKQSLISSYKKNLYPILKEEIQRNNNDSASLTSGTPRSSDNQWSTSWWEQFKVLLKRGLKEKRHESFSGLKIFQVLSVSILSGLLWWHSDPSHVQDQIGLLFFFSIFWGFFPLFNAIFVFPLERPMLKKEKSSGMYHLSSYYVARTIGDLPMELVLPTIFVTITYWMGGLKPSLVTFVLTLLIMLFNVLVSQGIGLAIGAILMDVKQATTLASVTMLVFLLAGGYYNQHMPSFIAWLKYISFSHYCYKLMVGVQYSVNEVYECEPGLHCRIRDFPSIKCLDLDNMWKDVAALTAMLVGYRVVAYLALKIRKLH 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0973 676 CDD ABCG_EPDR 70 311 - -
Lal13g0973 676 Pfam ABC transporter 114 257 IPR003439 GO:0005524
Lal13g0973 676 MobiDBLite consensus disorder prediction 7 41 - -
Lal13g0973 676 PANTHER ABC TRANSPORTER G FAMILY MEMBER 21 41 673 - -
Lal13g0973 676 SMART AAA_5 114 307 IPR003593 -
Lal13g0973 676 MobiDBLite consensus disorder prediction 1 41 - -
Lal13g0973 676 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 73 329 IPR003439 GO:0005524
Lal13g0973 676 Gene3D - 65 325 IPR027417 -
Lal13g0973 676 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 100 323 IPR027417 -
Lal13g0973 676 ProSitePatterns ABC transporters family signature. 229 243 IPR017871 GO:0005524
Lal13g0973 676 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 41 673 - -
Lal13g0973 676 Pfam ABC-2 type transporter 412 618 IPR013525 GO:0016020|GO:0140359
Lal13g0973 676 Pfam ABC-2 type transporter 286 349 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0973 Lal-Chr13 7040730 7045389 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0973 47 312 Calmodulin-binding Proteins AT2G36910 23.162 3.48e-09 58.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0819 12 6528421 6534236 Lal13g0973 13 7040730 7045389 LSH