Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0934 ATGAAGATAATTATTTTTGTGGTTTACAATGGGCATTATTTAAGGAATCTGTTACATTCTAAGTGCCAATTTGAAGAAAGAGTTAATCCTTTGTCATCATCAATGTTGAAGCAAAACCATTCCATAATGGCTCTTCTCCCTTTGTTTCTTGTCCTCGCCATTTCAACGGAAGAAGTGGAAGGGGCGAAACTATTTGTTTTTGGGGACTCATATCTTGATACAGGGAATTTCCTAACCTCAGCATCTTATAAGTCTCCATATGGAATAACTTATCCTGGTTATCCTGCTGGAAGATTTGGAAATGGTCGTGTCCTCACAGATTACCTTGCTTCTTTTCTGAAAATTGAAACTCCCACATCATATGCATTGAAAAATTCCTCAAATCTACAAAATGGTGTGAACTTTGCATTTGGAGGGACTGGAGTTTTCCAGACTAGGGTTGATGGACCAAACTTGACTGCCCAAATCGACTCATTTGAACAACTAATCAAAAAAAATGTGTATAACAAATCTGACGTGGAGTCCTCAATTGTTGTTGTGAATACCGGTGGCAATGATTATATAACATTCATACTAAAAGATAGGAACCTATTTGGAATAGCCAATTACATCAAATCCCTTGTGAACGAATTGACCGCAAATCTTAGACGTATTCGTAGCTTGGGGGCAGAGAAAATAGTTGTGTCGCTATTACAACCTGTTGGATGTTTGCCTACAATTTCTGTAGCATCCTTATACCGTAATTGCATTGACCTTCTTAACAACGTCCCCAAAGATCACAACAAAATATTACTTCAAAATGTGGAAGATCTGAATAAGGAAAGTGAAAAATCAGTTATCAAGACACTAGACCTCTATAACGCTTTCCTCTCTGCCATAGAAGATGTGCAGAAAAGTCAGAAAGATAATTCAACACTAATGAATCCACTTGAACCATGTTGTGCACCACTCACAGCTGGATTTGAATGTGGAAAGGTGGATGATAAAGGAAATAAGAAATATACTTTATGTGAGAATCCAGAGCTTTCATTCTTTTGGGATACTGTTCATCCTGCTCAAAACGGTTGGTTTTCTATCTTCGAGAAGTTGGAAACTTCTCTAAGCCAAATTATTGGGACAAATTAA 1125 0.3724 MKIIIFVVYNGHYLRNLLHSKCQFEERVNPLSSSMLKQNHSIMALLPLFLVLAISTEEVEGAKLFVFGDSYLDTGNFLTSASYKSPYGITYPGYPAGRFGNGRVLTDYLASFLKIETPTSYALKNSSNLQNGVNFAFGGTGVFQTRVDGPNLTAQIDSFEQLIKKNVYNKSDVESSIVVVNTGGNDYITFILKDRNLFGIANYIKSLVNELTANLRRIRSLGAEKIVVSLLQPVGCLPTISVASLYRNCIDLLNNVPKDHNKILLQNVEDLNKESEKSVIKTLDLYNAFLSAIEDVQKSQKDNSTLMNPLEPCCAPLTAGFECGKVDDKGNKKYTLCENPELSFFWDTVHPAQNGWFSIFEKLETSLSQIIGTN 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0934 374 Pfam GDSL-like Lipase/Acylhydrolase 64 355 IPR001087 GO:0016788
Lal13g0934 374 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 36 371 - -
Lal13g0934 374 PANTHER OSJNBB0059K02.9 PROTEIN 36 371 - -
Lal13g0934 374 Gene3D SGNH hydrolase 58 370 IPR036514 -
Lal13g0934 374 SUPERFAMILY SGNH hydrolase 63 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0934 Lal-Chr13 6593270 6597731 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0934 13 351 Acyl Lipid Metabolism Gene Families AT4G10950 25.668 1.46e-25 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0934 - - gmx:100790363 407.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0934 13 6593270 6597731 Lal13g0934 13 6593270 6597731 ECH
Lal13g0934 13 6593270 6597731 Lal24g0743 24 5554466 5557249 LSH