Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lal13g0928 | ATGGAAGAATGTTTAGATGGTGATGATATTCAGAGTCATATACTGAGATCAATGAGCAGCATGAGAATGATGAGTATTGGATCTTCAAGTAGAAGGAGTTGGAGTAATGGACAAGTAAATGGAGAAGTGTTTGAGAGGAATAGAAGCAAAAGAAGGGAAGATGATGAAGAAGAACTTAAATGGGCATCAATAGAGAGGCTTCCAACATTTGAAAGATTGAGGAAAAGCTTAGTGAAACAAGTTCTAGAGAGTGGAAGATTATATTATGAGGAAGTTGATATATCTAAGCTTGGTGTGATGGAAAAGAAGAATATCCTTGATGGTATATTAAAGATTGTTGAACAAGACAATCAGAAGTTTCTCTCTAGAATGAAGGAGAGAATTGATAGGGTGGGTATAGAGATTCCCAAGGTTGAAGTGAGATTTGAGCATTTGTATGTAGAAGGGAATGCATATGATGGAACCAGAGCACTGCCAACACTATTCAATTCTACCTTGAATGCTATAGAGAAAGTTCTTGGAACAATGAAGCTTCTCCCTTCAAAGAAAAATGTTATCAAGATACTCCATGATGTTAATGGAATCATTAGACCAGGAAGAATGACCTTGCTTTTGGGGCCTCCAAGATCTGGAAAAACTACAATGCTGAGAGCACTTGCTGGGAAACTTGACAGTGATTTAAGGGTATCGGGAAGAGTTACTTATTGTGGTCATGAGTTTTCAGAGTTTGTTCCTCAAAGAACATGTGCTTATATTAGTCAGCATGATCTTCATCATGGAGAGATGACAGTCCGAGAAACACTGGACTTTTCTGGACGCTGCTTGGGAGTTGGAACAAGGCATGATCTACTTGTGGAATTGTCGAGACGAGAAAAGCAATCAGGAATCAAACCAGATCCTGATATAGATGCTTTCATGAAAGCCACAGCAATGGAAGGTCAAGAAACAAGCCTCATTACGGATTATGTTCTCAAGATTCTTGGATTGGAAATATGTGCTGACACTATGGTAGGAGATGAGATGAGAAGGGGAATATCTGGTGGAGAAAAAAAGCGGCTGACTACTGGTGAGATGTTGGTAGGACCTGCAAAGGTTTTCTTAATGGATGAGATTTCAACTGGTTTAGATAGTTCCACCACCTTCCAAATTGTGAGGTTCTTGAGGCAGCTAGTTCATACCAATGATGTTACAGTTGTGATATCTCTTTTACAACCTGCACCCGAAACATTTGATCTTTTTGATGACATAATATTACTTTCAGAAGGTCAAATAGTCTACCAAGGTCCGCGTGAGAATGTTCTCGATTTCTTTGAGAGTGTGGGCTTCAAATGCCCAAAAAGGAAAGGTGTTGCAGACTTTTTACAGGAAGTTACTTCCAGAAAGGACCAAGAACAGTACTGGTTCATGAGGGACAAACCTTATCGCTTTATCAATGTGCCGGAGTTTGTAGCCCACTTAAACAATTATAGCATTGGTCAACAACTTCATCAAGACCTTAAGGTTCCTTATGACAGTACTAAAACTCATCCTGCTGCATTGGCTAAAGAAAACTATGGTATTTCAAAACCAGAACTCCTGAAGGCATGCTTTGCAAGAGAGTGGCTACTGATGAAGCGCAGTGCTCCTATATACATATTTAAGACTACTCAGATTTTGATAATGTCTTTGATTGCCATGACAGTGTTTCTGAGAACAGAAATGAAACATGGCAAACTTGAGGATGGGAGAAAATATTATGGTGCGCTATTCTTCGGTCTTATTAATGTAATGTTCAATGGGATGGCTGAGCTTGCAATGTCTATTCTTGGACTTCCTGTTTTCTTCAAGCAGAGAGATTTGTTATTTTATCCTGCATGGGCTTTTGCACTGCCCATATGGATCCTTCGAATCCCTCTCTCTTTCGTAGAGTCAGCATTATGGGTTTCCCTTACTTATTACACTATAGGATTTGCTCCAGCTGCAAGTAGATTTTTTCGTCAGTTATTAGCATTCTTCTGCGTTCATCAAATGTCTTTGTCTCTTTTCCGATTCTTGGCTGCGTTAGGAAGAACAATGGTTGTGGCAAATACACTTGGTACCTTTGTACTGCTACTTGTTTTTGTTCTTGGAGGGTTTATTATTTCCAAAGATAACATTGCAACATGGATGATATGGGGCTATTATGCTTCTCCTATGATGTATGGTCAGAATGCTATTGCCATTAATGAATTCCTCGACGAGAGATGGAGTGCTCCCAATATAGATCCAATAATTCCTGAGCCAACAGTTGGGAAGGCTCTTCTCAAGGCTAGAGGCATGTATACAGAAGACTATTGGTACTGGATTTGTATTGGTGCTCTCATAGGCTTTTCTCTGATTTTCAACATTTGTTTTATTCTTGCTCTCACATTTCTGAATCCATTTGGAGATTCTAAATCTATTATTTTGGAGGAGGAAAATGAGAAAAAGGGAACTAAAAATGAGAGTTCTGCTTCAGCAGCTAAATCATTTGACCAAAGAAACACCGAAGAGAGTTCAATTCGTAAAGCAAACACTGGAACAATCAAGAAGGGAATGATGTTACCCTTTCAGCCACTATCACTTACTTTTGATCATGTGAATTACTACATCAATATGCCAACAGAAATGAAAACACAAGGAGTTGAAGAGAGTCGCCTCCAATTACTAAGAGATGTCAGTGGTGCTTTCAGGCCTGGAGTACTAACTGCATTAGTAGGTGTAACCGGTGCTGGAAAAACTACCTTGCTTGATGTTCTTGCTGGAAGAAAAACTGGTGGCTATATTGAAGGAAGCATAAGCATATCTGGTTACCCAAAGAACCAAGCAACATTTGCGCGAATTAGTGGATATTGTGAACAAAATGATATCCATTCTCCAAACCTGACAGTTTATGAATCTCTTGTGTTTTCTGCTTGGCTCCGTCTTGGTAAGGAGGTCAAGAGAGAAACACAGAAGATGTTTGCTGAGGAAGTTATGAAGCTTGTTGACTTACATCCAGTGAGGAATTTTCTAGTAGGCCTTCCTGGCATAGATGGTTTGTCAACTGAACAAAGAAAGAGACTCACCATTGCTGTTGAATTGGTTGCCAATCCTTCTATCATCTTTATGGATGAACCGACGTCGGGACTTGATGCTAGAGCAGCAGCAATAGTTATGCGCACCGTCAGAAATACAGTTGATACCGGAAGAACCGTAGTCTGCACAATTCATCAACCAAGCTTTGACATATTTGAAAGTTTTGATGAGCTACTTTTGATGAAGAGAGGAGGGCAAATCATATATAGTGGTCCCCTTGGTAAACATTCTCAGAAACTCATAGATTACTTTGAGGCTATTCCCGGAGTTCCTAGAATCAAAGATGGATATAATCCTGCGACATGGATGTTGAAAATTAGTTCTCCATCAGTTGAATCTCAGCTTAATGTAGACTTTGCAGAATTGTATACTAAGAGAAATCAAGAACTTGTTAAAGAGCTAAGTACACCATTACACGGAACGAAGGACCTTTATTTCCCAACTAAATATTCCCGGTCCTTCATTACCCAATGCAAAGTTTGCTTTTTGAAACAGCATTGGTCCTACTGGAGGAACCCACAGTATAATGTCATTCGTTTCTTCTTGGCAATAACTGTTGGTCTTATTTTTGGACTCACTTTCTGGCAAAAAGGAGATAAAATAAATACGGAACAAGAACTTATGAATATAGTGGGAGCTATGTATGCTGCTGTTTTCTTTATTGGAGCCACCAACACAAACTCTGTTCAACCTGTAGTTGCAATAGAAAGAACAGTCTTCTACCGTGAAAGAGCGGCTGGAATGTACTCATCTCTACCTTATGCATTTGCACAGGTAGCAATAGAATGCATATATGTTGCAATCCAAACATTGATCTATTCTCTTATCCTTTTCTCAATGATTGGGTTCATTTGGCAAGCTGACAAGTTCTTTTGGTTCTACTACTTCATATTCATGTCCTTTGTCTACTTCACAATTTATGGAATGATGAATGTGGCTCTGACACCAAACCACCAAATTGCTGCAATTGTTATGTCCTTCTTTTTGGTGTTCTGGAACATATTCTCAGGATTTGTTATCCAAAAATCGCAAATTCCAATATGGTGGAGGTGGTACTACTGGGCATGTCCAACTGCATACACTATATATGGCCTAGTGACATCTCAGCTGGGTGACAAAGATTCTGAAATTGAAGTTCCTGGCTTTGGATCAATGTCACTAAAAACATATCTTCAGAAAGAAATGGGCTATGAATATGACTTCCTTGGAGTTGCTGCTGCTGCTCATGTAGGTTTTATTGCCTTGTTTCTTTTTGTATTTGCTTGTGGTATCAACTTCCTTAATTTCCAGAAGAGATAA | 4374 | 0.3925 | MEECLDGDDIQSHILRSMSSMRMMSIGSSSRRSWSNGQVNGEVFERNRSKRREDDEEELKWASIERLPTFERLRKSLVKQVLESGRLYYEEVDISKLGVMEKKNILDGILKIVEQDNQKFLSRMKERIDRVGIEIPKVEVRFEHLYVEGNAYDGTRALPTLFNSTLNAIEKVLGTMKLLPSKKNVIKILHDVNGIIRPGRMTLLLGPPRSGKTTMLRALAGKLDSDLRVSGRVTYCGHEFSEFVPQRTCAYISQHDLHHGEMTVRETLDFSGRCLGVGTRHDLLVELSRREKQSGIKPDPDIDAFMKATAMEGQETSLITDYVLKILGLEICADTMVGDEMRRGISGGEKKRLTTGEMLVGPAKVFLMDEISTGLDSSTTFQIVRFLRQLVHTNDVTVVISLLQPAPETFDLFDDIILLSEGQIVYQGPRENVLDFFESVGFKCPKRKGVADFLQEVTSRKDQEQYWFMRDKPYRFINVPEFVAHLNNYSIGQQLHQDLKVPYDSTKTHPAALAKENYGISKPELLKACFAREWLLMKRSAPIYIFKTTQILIMSLIAMTVFLRTEMKHGKLEDGRKYYGALFFGLINVMFNGMAELAMSILGLPVFFKQRDLLFYPAWAFALPIWILRIPLSFVESALWVSLTYYTIGFAPAASRFFRQLLAFFCVHQMSLSLFRFLAALGRTMVVANTLGTFVLLLVFVLGGFIISKDNIATWMIWGYYASPMMYGQNAIAINEFLDERWSAPNIDPIIPEPTVGKALLKARGMYTEDYWYWICIGALIGFSLIFNICFILALTFLNPFGDSKSIILEEENEKKGTKNESSASAAKSFDQRNTEESSIRKANTGTIKKGMMLPFQPLSLTFDHVNYYINMPTEMKTQGVEESRLQLLRDVSGAFRPGVLTALVGVTGAGKTTLLDVLAGRKTGGYIEGSISISGYPKNQATFARISGYCEQNDIHSPNLTVYESLVFSAWLRLGKEVKRETQKMFAEEVMKLVDLHPVRNFLVGLPGIDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSFDIFESFDELLLMKRGGQIIYSGPLGKHSQKLIDYFEAIPGVPRIKDGYNPATWMLKISSPSVESQLNVDFAELYTKRNQELVKELSTPLHGTKDLYFPTKYSRSFITQCKVCFLKQHWSYWRNPQYNVIRFFLAITVGLIFGLTFWQKGDKINTEQELMNIVGAMYAAVFFIGATNTNSVQPVVAIERTVFYRERAAGMYSSLPYAFAQVAIECIYVAIQTLIYSLILFSMIGFIWQADKFFWFYYFIFMSFVYFTIYGMMNVALTPNHQIAAIVMSFFLVFWNIFSGFVIQKSQIPIWWRWYYWACPTAYTIYGLVTSQLGDKDSEIEVPGFGSMSLKTYLQKEMGYEYDFLGVAAAAHVGFIALFLFVFACGINFLNFQKR | 1457 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lal13g0928 | 1457 | MobiDBLite | consensus disorder prediction | 813 | 842 | - | - | |
Lal13g0928 | 1457 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 885 | 1100 | IPR027417 | - | |
Lal13g0928 | 1457 | Pfam | ABC-transporter N-terminal | 113 | 163 | IPR029481 | - | |
Lal13g0928 | 1457 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 173 | 446 | IPR003439 | GO:0005524 | |
Lal13g0928 | 1457 | Gene3D | - | 875 | 1109 | IPR027417 | - | |
Lal13g0928 | 1457 | CDD | ABCG_PDR_domain1 | 176 | 428 | IPR034001 | - | |
Lal13g0928 | 1457 | Pfam | ABC-2 type transporter | 1070 | 1133 | IPR043926 | GO:0140359 | |
Lal13g0928 | 1457 | Pfam | ABC-2 type transporter | 404 | 457 | IPR043926 | GO:0140359 | |
Lal13g0928 | 1457 | Pfam | ABC-2 type transporter | 1181 | 1394 | IPR013525 | GO:0016020|GO:0140359 | |
Lal13g0928 | 1457 | Pfam | ABC-2 type transporter | 525 | 737 | IPR013525 | GO:0016020|GO:0140359 | |
Lal13g0928 | 1457 | Gene3D | - | 175 | 475 | IPR027417 | - | |
Lal13g0928 | 1457 | MobiDBLite | consensus disorder prediction | 822 | 842 | - | - | |
Lal13g0928 | 1457 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 186 | 446 | IPR027417 | - | |
Lal13g0928 | 1457 | PANTHER | DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN | 17 | 1457 | - | - | |
Lal13g0928 | 1457 | CDD | ABCG_PDR_domain2 | 858 | 1096 | IPR034003 | - | |
Lal13g0928 | 1457 | Pfam | ABC transporter | 189 | 371 | IPR003439 | GO:0005524 | |
Lal13g0928 | 1457 | Pfam | ABC transporter | 889 | 1041 | IPR003439 | GO:0005524 | |
Lal13g0928 | 1457 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 861 | 1114 | IPR003439 | GO:0005524 | |
Lal13g0928 | 1457 | SMART | AAA_5 | 198 | 430 | IPR003593 | - | |
Lal13g0928 | 1457 | SMART | AAA_5 | 898 | 1090 | IPR003593 | - | |
Lal13g0928 | 1457 | Pfam | Plant PDR ABC transporter associated | 752 | 808 | IPR013581 | - | |
Lal13g0928 | 1457 | PANTHER | ATP-BINDING CASSETTE TRANSPORTER | 17 | 1457 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lal13g0928 | Lal-Chr13 | 6503831 | 6516406 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lal13g0928 | 886 | 1073 | Calmodulin-binding Proteins | AT2G36910 | 27.586 | 1.47e-07 | 54.7 |