Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0922 ATGGGTGATCCATATGGGTTGCCGGAGGATCTCCGGCGGCTGATTTCATCCTCAAGAACAAGTCATTACAACACTACTACTACTACTACAACACATCTTCATCAGCCACCACTTTCACTATGTGTTTCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCCTCCACCCTATGACCCTAATATCATGGTTGGGGATGTTTTCTTCCCTCCTCGTTCTTCCTTCACACACTTCACTCATTATCATCATCATCATGACTTTTATAATTCCTCTTCTACTCTCAATCATACATCAACTAACACTAATACTATTTCTGCTACTCCTGCTGAAACTGCTTCAGATTATGCTGCTACTGCACCATTCACTAGTAGCATCAGTATAGAGAATAATAATACAGTTGCAGAAAAAGGTTGGCTTGGTTTTGATCCTGGTAACAATAGATGGCCTAGACAAGAGACCCTTTCTCTTCTAGAGATCAGATCTCGTCTTGATTCCAAGTTTAGAGAGAATAATCTCAAAGCACCTTTATGGAATGAAATTTCTAGGATAATGGCTGAGGAATTTGGTTACCAAAGAAGTGGAAAGAAATGCAAAGAGAAGTTTGAGAATTTGTACAAGTATTACAAGAAAACCAAAGAAGGTAAAGCTAGTAGACAAGATGGAAAACACTACAGATTCTTCAGGCAGCTTGAAGCAATATGTGGAGAACCAACCACTACTATTCATCATAATGCCTCGACTTCAGATAATAAAACCCATCATGATGCTATAAACACTAGTTCTGGCTTTCAATCTCCAACCTTTGCAACAAACCAAGACACTGTTAATGTTGATCACTTTCCTAACCACATGTCCTCAGAGAGCCTCAGTTTCTCAAACTTATCTGATCAATTAGAGACATCCTCATCTGAGAACAATGATGAAGATCTTTCAGCTATTGCATACATGATGAATCAATCAAGGGATAATAATAATGCTAATAATAAGCACAAGGGGTTAGAGTTAGACCATAGACAAAGTCAAGGGAGGGTGAGAAAAAGCTGGAGAGGTAAAATTGAAGAGATTGTTGGTTCCCACATGAGGAAGATTATAGAGACTCAAGATGCATGGATGGAGAAGATGTTAAGTGTTGTTGAAAGAAGGGGGCAAGAAATGGCATCTAAGGAGGAAGAAAGGAAGAGAAAAGAGTCAATGAGGTTTGATCAAGAAGTACATGAACTTTGGGCTAAAGAGAGAGCTTGGGTTGAAGCAAGAGATGCTGCATTGATAAAGGTTGTGAGGAAACATATTGGTTTCAAAGAACTTGAAACATTGCCATTACAACATGAAGCAATGGTTGTTGAAGAAGAACCACAAAATAAAAATAATGAGTATCCATGTGAAGCTGTTGTTAGTGGTAAATGGACAGAAATTGAGATATCAAATTTGATACAACTAAAGAATAGTTTTGAAGAGAGACTAAGAGAAAATGGGTGTTTGGTGCATAATGGCCTTTGGGATGAAATAGCAGCAAAATTGTGCTGTTTAGGCTTTGATAGAAGTGCAAGTGAGTGTAAACAAATATGGGATGAGATCAACATTTCTCTCAGAGTAACAACAGTGGAGTGTAGTAGTAGTGCTAATACGACAAGACCTTGGTGTTTGGGACTTAAGCTAAGGGATGATGATGAACTTTGA 1677 0.3888 MGDPYGLPEDLRRLISSSRTSHYNTTTTTTTHLHQPPLSLCVSPPPPPPPPPPLPPPYDPNIMVGDVFFPPRSSFTHFTHYHHHHDFYNSSSTLNHTSTNTNTISATPAETASDYAATAPFTSSISIENNNTVAEKGWLGFDPGNNRWPRQETLSLLEIRSRLDSKFRENNLKAPLWNEISRIMAEEFGYQRSGKKCKEKFENLYKYYKKTKEGKASRQDGKHYRFFRQLEAICGEPTTTIHHNASTSDNKTHHDAINTSSGFQSPTFATNQDTVNVDHFPNHMSSESLSFSNLSDQLETSSSENNDEDLSAIAYMMNQSRDNNNANNKHKGLELDHRQSQGRVRKSWRGKIEEIVGSHMRKIIETQDAWMEKMLSVVERRGQEMASKEEERKRKESMRFDQEVHELWAKERAWVEARDAALIKVVRKHIGFKELETLPLQHEAMVVEEEPQNKNNEYPCEAVVSGKWTEIEISNLIQLKNSFEERLRENGCLVHNGLWDEIAAKLCCLGFDRSASECKQIWDEINISLRVTTVECSSSANTTRPWCLGLKLRDDDEL 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0922 558 MobiDBLite consensus disorder prediction 22 37 - -
Lal13g0922 558 CDD GT1 146 212 - -
Lal13g0922 558 PANTHER TRIHELIX TRANSCRIPTION FACTOR PTL-LIKE 84 536 - -
Lal13g0922 558 SMART sant 144 207 IPR001005 -
Lal13g0922 558 SMART sant 464 528 IPR001005 -
Lal13g0922 558 Gene3D - 148 210 - -
Lal13g0922 558 Gene3D - 468 530 - -
Lal13g0922 558 SUPERFAMILY Formin homology 2 domain (FH2 domain) 44 224 - -
Lal13g0922 558 ProSiteProfiles Myb-like domain profile. 146 205 IPR001005 -
Lal13g0922 558 Pfam Myb/SANT-like DNA-binding domain 467 529 IPR044822 -
Lal13g0922 558 Pfam Myb/SANT-like DNA-binding domain 146 233 IPR044822 -
Lal13g0922 558 ProSiteProfiles Myb-like domain profile. 466 526 IPR001005 -
Lal13g0922 558 MobiDBLite consensus disorder prediction 22 56 - -
Lal13g0922 558 Coils Coil 316 336 - -
Lal13g0922 558 MobiDBLite consensus disorder prediction 39 56 - -
Lal13g0922 558 PANTHER - 84 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0922 Lal-Chr13 6467451 6470677 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0922 147 530 Trihelix Transcription Factor Family AT5G03680 41.646 3.64e-80 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lal13g0922 Myb_DNA-bind_4 2.9e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0922 - - lang:109336385 898.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0922 13 6467451 6470677 Lal13g0922 13 6467451 6470677 ECH