Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0916 ATGGATTCTCTAATAAGTAGTATATTGCTACTCCTGTTCACATGCACTGTCATACAAGTTCTACGTTCATTTTCCAATAAGGGAAACCACAATCTTCCACCAGGACCATCCCTTGTTACTATTTTGGGAAACCTTCATGAATTTTGGAAGAAACCACAACAAACAATGGCCAAACTTGCTAATGTCTATGGCCCAATAATGTGTTTCAAAGTAGGTCATTCAACAAGTGTAATAATCTCTTCACCAGACATGGCAAAAGAGGTTCTCCAAACACATGATATCTTATTCTCAGATCGAACAATTCCTCAAGTTGTAACATCTCTTAACCATGATCTTCTTAGCTTACCTTTCCTCCCAGTTTCACCACTTTGGAGAGACCTAAGGAAAATATGCAACAATGAATTATTTGCAAGCAAGACTCTTGATGCAAGCCAAGACCTTAGGCGCAAGAAACTTCAACAACTACTCAATGATATGCATCAAATTAGCTTAAGTGGTGAAGCAGTGAATGTTGGAATAGCAGCTTTCAAGACTTGCATTAATTTCTTATCATACACTTTTGTTTCTGAGGATTTTGTTCAAAATGTGAGTAATGATGATGAGTATAAGGATCTAGTGGCAACTCTTTTGAAATTAACTGGAACACCAAACTTGGTTGATTTATTCCCAGTGTTCAAGATATTTGACCCACAAGGCCTAAAAAGACGCACAACTTCTTACCTTACCAAGTTCTTCCAAATCCTGGATAACTTGATCAACAAACGAATAAAGTTAAGGGAAGAGAAACATTATGTTACAAACAATGACATGTTAGATACCCTCCTCAATGTTTCTGAACAGAATAGCCAAATGATGGACAAAAAAAAGATTAGACATTTCTTGCTGGATCTACTTGTTGCTGGAACGGATACAACTGCATATGCTTTAGAAAGGGCAATGACTGAACTAGTTCACAACCCTGCGATTATGACAAAAGCTAAGAAAGAGTTGGAACAAACCATTGGAATAGGTAACCCTATTGAGGAATCTGATATTGCTAGACTCCCTTATTTACAAGCAATAATAAAAGAGACATTAAGAAAGTACCCTCCAGCTCCACTCTTACTCCCTCGAAAAGCAAAGGTAGATGTTCAAATATCTGGTTACACTGTTCCAAAGGGTGCACGAGTCCTAATCAATGAGTGGGCTATTGGTAGAAACCCTAACTTTTGGGAAAATGCAAATTCATTTTCACCTCAAAGGTTTATAGGGTCAACAATTGATGTTAAAGGCCAAAATTTTCAGCTCACACCATTTGGAAGTGGACGAAGAATTTGTCCCGGCTCTCCATTGGCTATTAGGATGTTGCATTCGATGTTGGGATCTTTGATTAACACTTTTGATTGGAAACTTGAAAATGATATGAACCCAAAGGATATGAATTTGGATCAACCACTACAAGCTATTCCTATTAAAATAAACAACTAA 1467 0.3722 MDSLISSILLLLFTCTVIQVLRSFSNKGNHNLPPGPSLVTILGNLHEFWKKPQQTMAKLANVYGPIMCFKVGHSTSVIISSPDMAKEVLQTHDILFSDRTIPQVVTSLNHDLLSLPFLPVSPLWRDLRKICNNELFASKTLDASQDLRRKKLQQLLNDMHQISLSGEAVNVGIAAFKTCINFLSYTFVSEDFVQNVSNDDEYKDLVATLLKLTGTPNLVDLFPVFKIFDPQGLKRRTTSYLTKFFQILDNLINKRIKLREEKHYVTNNDMLDTLLNVSEQNSQMMDKKKIRHFLLDLLVAGTDTTAYALERAMTELVHNPAIMTKAKKELEQTIGIGNPIEESDIARLPYLQAIIKETLRKYPPAPLLLPRKAKVDVQISGYTVPKGARVLINEWAIGRNPNFWENANSFSPQRFIGSTIDVKGQNFQLTPFGSGRRICPGSPLAIRMLHSMLGSLINTFDWKLENDMNPKDMNLDQPLQAIPIKINN 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0916 488 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 432 441 IPR017972 GO:0005506|GO:0016705
Lal13g0916 488 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal13g0916 488 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal13g0916 488 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal13g0916 488 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal13g0916 488 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal13g0916 488 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal13g0916 488 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal13g0916 488 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal13g0916 488 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal13g0916 488 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal13g0916 488 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal13g0916 488 PRINTS P450 superfamily signature 439 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal13g0916 488 Gene3D Cytochrome P450 24 481 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal13g0916 488 SUPERFAMILY Cytochrome P450 29 484 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal13g0916 488 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 486 - -
Lal13g0916 488 Pfam Cytochrome P450 33 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal13g0916 488 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0916 Lal-Chr13 6377914 6381666 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0916 1 485 Cytochrome P450 AT2G45550 40.119 6.12e-134 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0916 - - aip:107612182 674.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0916 13 6377914 6381666 Lal13g0916 13 6377914 6381666 ECH