Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0903 ATGGCTTACCCTATCCTATTCCTCATTTTCCTTTCCCTACCATTTTCTTCAGCCAAACTAAGCCTTAAATACTACAATGCAACATGTCCTGACTTTGAAAAAATTGTAAGAGAAAACGTGTTCAACAAGCAAAGTGCTGTTCCAGCCACTGCACCAGGCCTTCTCAGAATGTTCTTCCATGATTGCATCACAGATGGTTGTGATGCTTCCATCCTTATTGCATCTAGTGCATATAACCACCACACGGAGCGCGACGCTGAACTCAACGCCGCGCTCTCAGGTGATGCATTCGACATTATTTCGAGGATTAAGAATGCCATGGAGCTAGCATGCCCTGGAATTGTGTCATGCTCAGACATTGTTGCACAAGCAACTAGGGATCTTGTAAAGATGGTTGGTGGGCCATTCTATAATGTGAGGTTAGGGAGAAAGGATAGCAAAGTTTCTGATGCTAAAAGAGTTGATGCAAGCCTTCCAACTACAAAGATGACAATGGATCAAATAATAGAGAAATTCACAGCAAAGAAATTCAGTATTAGAGATATGGTTGCTTTGACTGGTGCACATACAATAGGGTTCACACATTGTAAGGAATTTAGTGATAGGATCTACCCTACAGTTGACCCTACATTGCACCCAAAGCTAGCTGCTGGGTTGAGACAAATTTGCCAGAACTACACTATAGACACATCAATGGCAGCATTCAATGATGTTAGATCACCAAGCACCTTTGACAATGCATTCTTCAAGAATATCCTTAAGGGGCTAGGACTATTAAGAACAGATTATTTTTTGAGTGTTGACCCAAGGACAAGGCCAATAGTGGAGGAGTATGCAAAAGATCAACAAGCATTTTTCAAAGATTTTGCTAAGGCTATGGAGAAGGTTTCTGTGTTGGGAGTGAAGACTGGTCATAAAGGAGAAGTGAGGAATAGGTGTGATCAATTCAATAATAATATTCATGCATAA 969 0.4097 MAYPILFLIFLSLPFSSAKLSLKYYNATCPDFEKIVRENVFNKQSAVPATAPGLLRMFFHDCITDGCDASILIASSAYNHHTERDAELNAALSGDAFDIISRIKNAMELACPGIVSCSDIVAQATRDLVKMVGGPFYNVRLGRKDSKVSDAKRVDASLPTTKMTMDQIIEKFTAKKFSIRDMVALTGAHTIGFTHCKEFSDRIYPTVDPTLHPKLAAGLRQICQNYTIDTSMAAFNDVRSPSTFDNAFFKNILKGLGLLRTDYFLSVDPRTRPIVEEYAKDQQAFFKDFAKAMEKVSVLGVKTGHKGEVRNRCDQFNNNIHA 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0903 322 SUPERFAMILY Heme-dependent peroxidases 20 317 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lal13g0903 322 ProSitePatterns Peroxidases active site signature. 51 62 IPR019794 GO:0004601
Lal13g0903 322 ProSiteProfiles Plant heme peroxidase family profile. 19 317 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal13g0903 322 ProSitePatterns Peroxidases proximal heme-ligand signature. 181 191 IPR019793 -
Lal13g0903 322 Gene3D - 23 317 - -
Lal13g0903 322 PANTHER PEROXIDASE 41 6 318 - -
Lal13g0903 322 PRINTS Haem peroxidase superfamily signature 51 65 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal13g0903 322 PRINTS Haem peroxidase superfamily signature 115 132 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal13g0903 322 PRINTS Haem peroxidase superfamily signature 133 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal13g0903 322 PRINTS Haem peroxidase superfamily signature 181 196 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal13g0903 322 PRINTS Haem peroxidase superfamily signature 237 252 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal13g0903 322 PANTHER - 6 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal13g0903 322 CDD secretory_peroxidase 19 316 IPR033905 GO:0004601|GO:0042744
Lal13g0903 322 Gene3D Peroxidase, domain 2 159 296 - -
Lal13g0903 322 PRINTS Plant peroxidase signature 29 48 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal13g0903 322 PRINTS Plant peroxidase signature 53 73 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal13g0903 322 PRINTS Plant peroxidase signature 95 108 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal13g0903 322 PRINTS Plant peroxidase signature 114 124 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal13g0903 322 PRINTS Plant peroxidase signature 133 148 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal13g0903 322 PRINTS Plant peroxidase signature 180 192 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal13g0903 322 PRINTS Plant peroxidase signature 235 250 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal13g0903 322 PRINTS Plant peroxidase signature 251 268 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal13g0903 322 PRINTS Plant peroxidase signature 291 304 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal13g0903 322 Pfam Peroxidase 44 281 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0903 Lal-Chr13 6220390 6221358 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0903 3 318 Peroxidase AT5G47000 54.375 3.42e-127 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0903 K00430 - gmx:100795676 491.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0796 12 6203014 6203985 Lal13g0903 13 6220390 6221358 LSH
Lal13g0903 13 6220390 6221358 Lal24g0716 24 5356796 5357764 LSH